asm-3;pdk-1

Lifespan changes: From wild type to asm-3;pdk-1

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Genetic mutants with asm-3, pdk-1 alterations

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    20

  • Lifespan (days)

    21.7

  • Lifespan change (compared to wild type)

    50.69%

  • Phenotype

    Loss of asm-3 did not further extend the lifespan in the partial loss-of-function pdk-1(sa709) mutant background. This result suggests that asm-3 and pdk-1 likely function in the same pathway. 

  • Lifespan comparisons

    Double mutant asm-3(ok1744);pdk-1(sa709) has a lifespan of 21.7 days, while single mutant pdk-1(sa709) has a lifespan of 21.1 days, single mutant asm-3(ok1744) has a lifespan of 16.7 days and wild type has a lifespan of 14.4 days.

  • Type of interaction
    See methods

    Almost additive (positive)

  • Citation
    View abstract

    Kim Y, Sun H, 2012;7(9):e45890., ASM-3 acid sphingomyelinase functions as a positive regulator of the DAF-2/AGE-1 signaling pathway and serves as a novel anti-aging target. PLoS One. 7(9):e45890 PubMed 23049887 Click here to select all mutants from this PubMed ID in the graph

Search genes: asm-3 pdk-1
  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Putative sphingomyelin phosphodiesterase asm-3;Sphingomyelin phosphodiesterase


Locus: CELE_W03G1.7


Wormbase description: none available


  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

3-phosphoinositide-dependent protein kinase 1


Locus: CELE_H42K12.1


Wormbase description: pdk-1 encodes the C. elegans 3-phosphoinositide-dependent kinase 1 ortholog; PDK-1 is a component of the DAF-2/insulin receptor-like signaling pathway and accordingly, functions to regulate such processes as dauer larvae formation, longevity, and salt chemotaxis learning; genetic analyses indicate that, in regulating dauer arrest, PDK-1 acts downstream of AGE-1/PI3K and upstream of the AKT-1 and AKT-2 kinases; a PDK-1::GFP fusion protein is expressed broadly beginning in late stage embryos and continuing on through adulthood; expression is seen in head, tail, and ventral cord motor neurons, pharyngeal tissues, hypodermal cells, the intestine, and the somatic gonad; in neurons, the PDK-1::GFP localizes to cell bodies and processes, with occasional expression seen in some neuronal nuclei.


Orthologs of asm-3;pdk-1 in SynergyAge
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Orthologs of asm-3 in SynergyAge
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Species Gene
Orthologs of pdk-1 in SynergyAge
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About

SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.

Read more about SynergyAge database

How to cite us

If you would like to cite this database please use:

Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z

Contact
Robi Tacutu, Ph.D.
Head: Systems Biology of Aging Group, Bioinformatics & Structural Biochemistry Department
Institute of Biochemistry, Ground floor
Splaiul Independentei 296, Bucharest, Romania
Email:

Group webpage: www.aging-research.group