sod-2;sod-3;sod-5

Lifespan changes: From wild type to sod-2;sod-3;sod-5

There is no network for this step.
Fullscreen mode
Hide graph
Legend

Genetic mutants with sod-2, sod-3, sod-5 alterations

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    20

  • Lifespan (days)

    20.3

  • Lifespan change (compared to wild type)

    14.69%

  • Phenotype

    Both sod-2;sod-3;sod-5 and sod-1;sod-2;sod-4 mutant worms live significantly longer than wild-type

  • Lifespan comparisons

    Triple mutant sod-2(ok1030);sod-3(tm760);sod-5(tm1246) has a lifespan of 20.3 days, while double mutant sod-3(tm760);sod-5(tm1246) has a lifespan of 20 days, single mutant sod-2(ok1030) has a lifespan of 27.2 days and wild type has a lifespan of 17.7 days.

  • Type of interaction
    See methods

    Contains dependence

  • Citation
    View abstract

    Van Raamsdonk JM, Hekimi S, 2009, Deletion of the mitochondrial superoxide dismutase sod-2 extends lifespan in Caenorhabditis elegans. PLoS Genet. 5(2):e1000361 PubMed 19197346 Click here to select all mutants from this PubMed ID in the graph

Search genes: sod-2 sod-3 sod-5 sod-2;sod-3;sod-5
  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Superoxide dismutase [Mn] 1, mitochondrial


Locus: CELE_F10D11.1


Wormbase description: sod-2 encodes a iron/manganese superoxide dismutase, predicted to be mitochondrial, that might defend against oxidative stress and promote normal lifespan; sod-2 mRNA levels are diminished by mutation of daf-16, and heterologously expressed SOD-2 in E. coli protects against methyl viologen-induced oxidative stress.


  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Superoxide dismutase [Mn] 2, mitochondrial


Locus: CELE_C08A9.1


Wormbase description: sod-3 encodes a iron/manganese superoxide dismutase, predicted to be mitochondrial, that might defend against oxidative stress and promote normal lifespan; sod-3 mRNA levels are diminished by mutation of daf-16 and chromatin immunoprecipitation (ChIP) studies demonstrate that DAF-16 can directly bind the sod-3 promoter; heterologously expressed SOD-3 in E. coli protects against methyl viologen-induced oxidative stress.


  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Superoxide dismutase [Cu-Zn]


Locus: CELE_ZK430.3


Wormbase description: sod-5 encodes one of five superoxide (SOD) isozymes in C. elegans; along with SOD-1, SOD-5 is predicted to be one of two cytoplasmic Cu/Zn SODs in C. elegans; sod-5 expression is increased in sod-1 mutant animals and likewise, sod-1 expression is increased in sod-5 mutants, suggesting a possible mechanism of functional compensation between these two genes; the sod-5 promoter contains one copy of a DAF-16 binding element, consistent with observations that sod-5 mRNA levels increase in insulin/IGF-1 signaling pathway mutants.


Orthologs of sod-2;sod-3;sod-5 in SynergyAge
Show in SynergyAge
Species Gene
Orthologs of sod-2 in SynergyAge
Show in SynergyAge
Species Gene
Drosophila melanogaster Sod2
Orthologs of sod-3 in SynergyAge
Show in SynergyAge
Species Gene
Drosophila melanogaster Sod2
Orthologs of sod-5 in SynergyAge
Show in SynergyAge
Species Gene
Drosophila melanogaster Sod1
Mus musculus Sod1
About

SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.

Read more about SynergyAge database

How to cite us

If you would like to cite this database please use:

Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z

Contact
Robi Tacutu, Ph.D.
Head: Systems Biology of Aging Group, Bioinformatics & Structural Biochemistry Department
Institute of Biochemistry, Ground floor
Splaiul Independentei 296, Bucharest, Romania
Email:

Group webpage: www.aging-research.group