clk-1;sod-2

Lifespan changes: From wild type to clk-1;sod-2

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Genetic mutants with clk-1, sod-2 alterations

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    20

  • Lifespan (days)

    43.7

  • Lifespan change (compared to wild type)

    146.89%

  • Phenotype

    clk-1 worms showed a marked extension of lifespan when sod-2 was deleted

  • Lifespan comparisons

    Double mutant clk-1(qm30);sod-2(ok1030) has a lifespan of 43.7 days, while single mutant clk-1(qm30) has a lifespan of 29.1 days, single mutant sod-2(ok1030) has a lifespan of 27.2 days and wild type has a lifespan of 17.7 days.

  • Type of interaction
    See methods

    Synergistic (positive)

  • Citation
    View abstract

    Van Raamsdonk JM, Hekimi S, 2009, Deletion of the mitochondrial superoxide dismutase sod-2 extends lifespan in Caenorhabditis elegans. PLoS Genet. 5(2):e1000361 PubMed 19197346 Click here to select all mutants from this PubMed ID in the graph

Search genes: clk-1 sod-2
  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

5-demethoxyubiquinone hydroxylase, mitochondrial


Locus: CELE_ZC395.2


Wormbase description: clk-1 encodes the C. elegans ortholog of COQ7/CAT5, a highly conserved demethoxyubiquinone (DMQ) hydroxylase that is necessary for the biosynthesis of ubiquinone (coenzyme Q, Q9) from 5-demethoxyubiquinone (DMQ9); in C. elegans, CLK-1 activity is required for normal physiological rates of growth, development, behavior, and aging, as well as for normal brood sizes.


  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Superoxide dismutase [Mn] 1, mitochondrial


Locus: CELE_F10D11.1


Wormbase description: sod-2 encodes a iron/manganese superoxide dismutase, predicted to be mitochondrial, that might defend against oxidative stress and promote normal lifespan; sod-2 mRNA levels are diminished by mutation of daf-16, and heterologously expressed SOD-2 in E. coli protects against methyl viologen-induced oxidative stress.


Orthologs of clk-1;sod-2 in SynergyAge
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Species Gene
Orthologs of clk-1 in SynergyAge
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Species Gene
Orthologs of sod-2 in SynergyAge
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Species Gene
Drosophila melanogaster Sod2
About

SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.

Read more about SynergyAge database

How to cite us

If you would like to cite this database please use:

Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z

Contact
Robi Tacutu, Ph.D.
Head: Systems Biology of Aging Group, Bioinformatics & Structural Biochemistry Department
Institute of Biochemistry, Ground floor
Splaiul Independentei 296, Bucharest, Romania
Email:

Group webpage: www.aging-research.group