isp-1;sod-2

Lifespan changes: From wild type to isp-1;sod-2

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Genetic mutants with isp-1, sod-2 alterations

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    20

  • Lifespan (days)

    16.9

  • Lifespan change (compared to wild type)

    -4.52%

  • Phenotype

    sod-2 deletion greatly shortened the lifespan of isp-1 worms such that isp-1;sod-2 worms had a shorter lifespan than wild-type N2 worms

  • Lifespan comparisons

    Double mutant isp-1(qm150);sod-2(ok1030) has a lifespan of 16.9 days, while single mutant isp-1(qm150) has a lifespan of 42.3 days, single mutant sod-2(ok1030) has a lifespan of 27.2 days and wild type has a lifespan of 17.7 days.

  • Type of interaction
    See methods

    Antagonistic (negative)

  • Citation
    View abstract

    Van Raamsdonk JM, Hekimi S, 2009, Deletion of the mitochondrial superoxide dismutase sod-2 extends lifespan in Caenorhabditis elegans. PLoS Genet. 5(2):e1000361 PubMed 19197346 Click here to select all mutants from this PubMed ID in the graph

Search genes: isp-1 sod-2
  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Cytochrome b-c1 complex subunit Rieske, mitochondrial


Locus: CELE_F42G8.12


Wormbase description: isp-1 encodes a Rieske iron sulphur protein (ISP) which is a subunit of the mitochondrial complex III in the mitochondrial membrane; the subunits are highly conserved in all mitochondria and aerobic bacteria; mitochondrial complex III catalyses electron transport from ubiquinol to cytochrome c; isp-1 mutants show low oxygen consumption, a decreased sensitivity to reactive oxygen species and increased lifespan suggesting that mitochondrial electron transport is a key factor affecting life span; isp-1 affects the rates of physiological processes like reproduction and development and also affects behavior.


  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Superoxide dismutase [Mn] 1, mitochondrial


Locus: CELE_F10D11.1


Wormbase description: sod-2 encodes a iron/manganese superoxide dismutase, predicted to be mitochondrial, that might defend against oxidative stress and promote normal lifespan; sod-2 mRNA levels are diminished by mutation of daf-16, and heterologously expressed SOD-2 in E. coli protects against methyl viologen-induced oxidative stress.


Orthologs of isp-1;sod-2 in SynergyAge
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Species Gene
Orthologs of isp-1 in SynergyAge
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Species Gene
Orthologs of sod-2 in SynergyAge
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Species Gene
Drosophila melanogaster Sod2
About

SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.

Read more about SynergyAge database

How to cite us

If you would like to cite this database please use:

Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z

Contact
Robi Tacutu, Ph.D.
Head: Systems Biology of Aging Group, Bioinformatics & Structural Biochemistry Department
Institute of Biochemistry, Ground floor
Splaiul Independentei 296, Bucharest, Romania
Email:

Group webpage: www.aging-research.group