hif-1;xbp-1

Lifespan changes: From wild type to hif-1;xbp-1

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Genetic mutants with hif-1, xbp-1 alterations

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    25

  • Diet

    OP50

  • Lifespan (days)

    14.3

  • Lifespan change (compared to wild type)

    -4.03%

  • Phenotype

    RNAi knocking-down of xbp-1, an essential transcription factor downstream of IRE-1 for ER stress response, suppressed the lifespan extension by hif-1.

  • Lifespan comparisons

    Double mutant hif-1(ia04);xbp-1(RNAi) has a lifespan of 14.3 days, while single mutant hif-1(ia04) has a lifespan of 17.8 days, single mutant xbp-1(RNAi) has a lifespan of 13.5 days and wild type has a lifespan of 14.9 days.

  • Type of interaction
    See methods

    Opposite lifespan effects of single mutants

  • Citation
    View abstract

    Chen D et al., 2009, HIF-1 modulates dietary restriction-mediated lifespan extension via IRE-1 in Caenorhabditis elegans. PLoS Genet. 5(5):e1000486 PubMed 19461873 Click here to select all mutants from this PubMed ID in the graph

Search genes: hif-1 xbp-1
  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

HIF (Hypoxia Inducible Factor) homologa;Hypoxia-inducible factor 1


Locus: CELE_F38A6.3


Wormbase description: hif-1 encodes an ortholog of the mammalian hypoxia-induced factor HIF-1, and is required for survival in hypoxic environments (1% oxygen) that have no effect on wild-type C. elegans.


  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

X-box Binding Protein homolog


Locus: CELE_R74.3


Wormbase description: xbp-1 encodes a bZIP transcription factor orthologous to yeast Hac1 and mammalian X box-binding protein 1 (XBP-1, OMIM:194355); XBP-1 is required for the unfolded protein response (UPR) that counteracts cellular stress induced by accumulation of unfolded proteins in the endoplasmic reticulum (ER); xbp-1 mRNA is spliced by the IRE-1 endoribonuclease to promote translation of transcriptionally active XBP-1 that positively regulates UPR gene expression to maintain ER homeostasis and promote normal development; loss of xbp-1 activity also results in near-complete loss of myo-2 pharnygeal myosin expression, although pharyngeal muscle is still present.


Orthologs of hif-1;xbp-1 in SynergyAge
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Orthologs of hif-1 in SynergyAge
Show in SynergyAge
Species Gene
Orthologs of xbp-1 in SynergyAge
Show in SynergyAge
Species Gene
About

SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.

Read more about SynergyAge database

How to cite us

If you would like to cite this database please use:

Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z

Contact
Robi Tacutu, Ph.D.
Head: Systems Biology of Aging Group, Bioinformatics & Structural Biochemistry Department
Institute of Biochemistry, Ground floor
Splaiul Independentei 296, Bucharest, Romania
Email:

Group webpage: www.aging-research.group