Lifespan changes: From wild type to hif-1;xbp-1
25
OP50
14.3
-4.03%
RNAi knocking-down of xbp-1, an essential transcription factor downstream of IRE-1 for ER stress response, suppressed the lifespan extension by hif-1.
Double mutant hif-1(ia04);xbp-1(RNAi) has a lifespan of 14.3 days, while single mutant hif-1(ia04) has a lifespan of 17.8 days, single mutant xbp-1(RNAi) has a lifespan of 13.5 days and wild type has a lifespan of 14.9 days.
Opposite lifespan effects of single mutants
Chen D et al., 2009, HIF-1 modulates dietary restriction-mediated lifespan extension via IRE-1 in Caenorhabditis elegans. PLoS Genet. 5(5):e1000486 19461873 Click here to select all mutants from this PubMed ID in the graph
X-box Binding Protein homolog
Locus: CELE_R74.3
Wormbase description: xbp-1 encodes a bZIP transcription factor orthologous to yeast Hac1 and mammalian X box-binding protein 1 (XBP-1, OMIM:194355); XBP-1 is required for the unfolded protein response (UPR) that counteracts cellular stress induced by accumulation of unfolded proteins in the endoplasmic reticulum (ER); xbp-1 mRNA is spliced by the IRE-1 endoribonuclease to promote translation of transcriptionally active XBP-1 that positively regulates UPR gene expression to maintain ER homeostasis and promote normal development; loss of xbp-1 activity also results in near-complete loss of myo-2 pharnygeal myosin expression, although pharyngeal muscle is still present.
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SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.
If you would like to cite this database please use:
Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z
Group webpage: www.aging-research.group