cyc-1;nhr-80

Lifespan changes: From wild type to cyc-1;nhr-80

There is no network for this step.
Fullscreen mode
Hide graph
Legend

Genetic mutants with cyc-1, nhr-80 alterations

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    20

  • Diet

    HT115

  • Lifespan (days)

    32.0

  • Lifespan change (compared to wild type)

    64.10%

  • Phenotype

    cyc-1 RNAi, which reduces mitochondrial function, extend longevity to a comparable extent in nhr-80(tm1011) mutants and in wild type animals, suggesting that these pathways are not affected by NHR-80.

  • Lifespan comparisons

    Double mutant cyc-1(RNAi);nhr-80(tm1011) has a lifespan of 32.0 days, while single mutant nhr-80(tm1011) has a lifespan of 15.5 days, single mutant cyc-1(RNAi) has a lifespan of 30.0 days and wild type has a lifespan of 19.5 days.

  • Type of interaction
    See methods

    Enhancer, opposite lifespan effects

  • Citation
    View abstract

    Goudeau J et al., 2011, Fatty acid desaturation links germ cell loss to longevity through NHR-80/HNF4 in C. elegans. PLoS Biol. 9(3):e1000599 PubMed 21423649 Click here to select all mutants from this PubMed ID in the graph

  • Temperature °C

    20

  • Diet

    HT115

  • Lifespan (days)

    19.5

  • Lifespan change (compared to wild type)

    18.18%

  • Phenotype

    cyc-1 RNAi, which reduces mitochondrial function, extend longevity to a comparable extent in nhr-80(tm1011) mutants and in wild type animals, suggesting that these pathways are not affected by NHR-80.

  • Lifespan comparisons

    Double mutant cyc-1(RNAi);nhr-80(tm1011) has a lifespan of 19.5 days, while single mutant nhr-80(tm1011) has a lifespan of 15.0 days, single mutant cyc-1(RNAi) has a lifespan of 20.0 days and wild type has a lifespan of 16.5 days.

  • Type of interaction
    See methods

    Opposite lifespan effects of single mutants

  • Citation
    View abstract

    Goudeau J et al., 2011, Fatty acid desaturation links germ cell loss to longevity through NHR-80/HNF4 in C. elegans. PLoS Biol. 9(3):e1000599 PubMed 21423649 Click here to select all mutants from this PubMed ID in the graph

Search genes: cyc-1 nhr-80
  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

CYtochrome C


Locus: CELE_C54G4.8


Wormbase description: cyc-1 encodes a component of complex III ( cytochrome c reductase) required for normal ATP production; reduction of ATP production by cyc-1(RNAi) decreases growth rate and body size, slows behavior, and increases lifespan; cyc-1 encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial


  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Nuclear Hormone Receptor family


Locus: CELE_H10E21.3


Wormbase description: nhr-80 encodes a nuclear hormone receptor, expressed in the intestine, that regulates expression of the delta-9 desaturases FAT-5/-6/-7, and thus regulates fatty acid metabolism; NHR-80 is fully required for any expression of FAT-7, full expression of FAT-5/-6, viability in the absence of FAT-6, and transcriptional hyperactivation of fat-7 in the absence of FAT-6, and for a fully normal adult lifespan; nhr-80 is expressed robustly in the intestine during larval and adult stages of development, with some expression also seen in head muscles; nhr-80 is specific to nematodes, being a divergent ortholog of HNF4 with many paralogs in C. elegans; nhr-80(tm1011) mutants, like nhr-49 mutants, have an increased ration of saturated 18:0 fatty acids to monounsaturated 18:1 ones (4.6 instead of 2.2); nhr-80(tm1011) mutants are viable and fertile and have no increase in fat storage, but double fat-6(tm331);nhr-80(tm1011) mutants, (or fat-6(tm331) mutants subjected to nhr-80(RNAi), are synthetically lethal unless cultured on media supplemented with desaturated fatty acids.


Orthologs of cyc-1;nhr-80 in SynergyAge
Show in SynergyAge
Species Gene
Orthologs of cyc-1 in SynergyAge
Show in SynergyAge
Species Gene
Orthologs of nhr-80 in SynergyAge
Show in SynergyAge
Species Gene
About

SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.

Read more about SynergyAge database

How to cite us

If you would like to cite this database please use:

Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z

Contact
Robi Tacutu, Ph.D.
Head: Systems Biology of Aging Group, Bioinformatics & Structural Biochemistry Department
Institute of Biochemistry, Ground floor
Splaiul Independentei 296, Bucharest, Romania
Email:

Group webpage: www.aging-research.group