daf-9;glp-1;nhr-80

Lifespan changes: From wild type to daf-9;glp-1;nhr-80

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Genetic mutants with daf-9, glp-1, nhr-80 alterations

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    20

  • Diet

    HT115

  • Lifespan (days)

    15.0

  • Phenotype

    nhr-80 overexpression extends the lifespan of glp-1(e2141ts);daf-9(rh50) mutants.

  • Lifespan comparisons

    Triple mutant daf-9(rh50);glp-1(e2141ts);nhr-80(OE) has a lifespan of 15.0 days, while double mutant daf-9(rh50);glp-1(e2141ts) has a lifespan of 10.0 days.

  • Citation
    View abstract

    Goudeau J et al., 2011, Fatty acid desaturation links germ cell loss to longevity through NHR-80/HNF4 in C. elegans. PLoS Biol. 9(3):e1000599 PubMed 21423649 Click here to select all mutants from this PubMed ID in the graph

  • Temperature °C

    20

  • Diet

    HT115

  • Lifespan (days)

    16.0

  • Phenotype

    nhr-80 overexpression extends the lifespan of glp-1(e2141ts);daf-9(rh50) mutants.

  • Lifespan comparisons

    Triple mutant daf-9(rh50);glp-1(e2141ts);nhr-80(OE) has a lifespan of 16.0 days, while double mutant daf-9(rh50);glp-1(e2141ts) has a lifespan of 10.0 days.

  • Citation
    View abstract

    Goudeau J et al., 2011, Fatty acid desaturation links germ cell loss to longevity through NHR-80/HNF4 in C. elegans. PLoS Biol. 9(3):e1000599 PubMed 21423649 Click here to select all mutants from this PubMed ID in the graph

  • Temperature °C

    20

  • Diet

    HT115

  • Lifespan (days)

    13.0

  • Phenotype

    nhr-80 overexpression extends the lifespan of glp-1(e2141ts);daf-9(rh50) mutants.

  • Lifespan comparisons

    Triple mutant daf-9(rh50);glp-1(e2141ts);nhr-80(OE) has a lifespan of 13.0 days, while double mutant daf-9(rh50);glp-1(e2141ts) has a lifespan of 10.5 days.

  • Citation
    View abstract

    Goudeau J et al., 2011, Fatty acid desaturation links germ cell loss to longevity through NHR-80/HNF4 in C. elegans. PLoS Biol. 9(3):e1000599 PubMed 21423649 Click here to select all mutants from this PubMed ID in the graph

Search genes: daf-9 glp-1 nhr-80 daf-9;glp-1;nhr-80
  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Cytochrome P450 daf-9


Locus: CELE_T13C5.1


Wormbase description: daf-9 encodes a cytochrome P450 of the CYP2 subfamily that by homology is predicted to function as a steroidogenic or fatty acid hydroxylase; DAF-9 likely functions cell nonautonomously in hypodermal and neuronal cells to produce, for the DAF-12 nuclear receptor, a lipophilic hormone whose presence is necessary for bypassing entry into the alternative L3/dauer larval stage and promoting reproductive development; in regulating dauer formation, daf-9 acts downstream of the DAF-2/insulin/IGF receptor and the DAF-7/TGFbeta ligand, suggesting that at least two of the signaling pathways that control dauer formation converge, in part, upon daf-9; in addition, daf-9 activity is required for gonadal cell migration; a DAF-9::GFP fusion is expressed in the XXXL/R head cells at all developmental stages, in hypodermal cells from the L2 to L4 larval stages, and in the spermatheca of adult hermaphrodites.


  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Protein glp-1


Locus: CELE_F02A9.6


Wormbase description: glp-1 encodes an N-glycosylated transmembrane protein that, along with LIN-12, comprises one of two C. elegans members of the LIN-12/Notch family of receptors; from the N- to the C-terminus, GLP-1 is characterized by ten extracellular EGF-like repeats, three LIN-12/Notch repeats, a CC-linker, a transmembrane domain, a RAM domain, six intracellular ankyrin repeats, and a PEST sequence; in C. elegans, GLP-1 activity is required for cell fate specification in germline and somatic tissues; in the germline, GLP-1, acting as a receptor for the DSL family ligand LAG-2, is essential for mitotic proliferation of germ cells and maintenance of germline stem cells; in somatic tissues, maternally provided GLP-1, acting as a receptor for the DSL family ligand APX-1, is required for inductive interactions that specify the fates of certain embryonic blastomeres; GLP-1 is also required for some later embryonic cell fate decisions, and in these decisions its activity is functionally redundant with that of LIN-12; GLP-1 expression is regulated temporally and spatially via translational control, as GLP-1 mRNA, present ubiquitously in the germline and embryo, yields detectable protein solely in lateral, interior, and endomembranes of distal, mitotic germ cells, and then predominantly in the AB blastomere and its descendants in the early embryo; proper spatial translation of glp-1 mRNA in the embryo is dependent upon genes such as the par genes, that are required for normal anterior-posterior asymmetry in the early embryo; signaling through GLP-1 controls the activity of the downstream Notch pathway components LAG-3 and LAG-1, the latter being predicted to function as part of a transcriptional feedback mechanism that positively regulates GLP-1 expression; signaling through the DNA-binding protein LAG-1 is believed to involve a direct interaction between LAG-1 and the GLP-1 RAM and ankyrin domains


  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Nuclear Hormone Receptor family


Locus: CELE_H10E21.3


Wormbase description: nhr-80 encodes a nuclear hormone receptor, expressed in the intestine, that regulates expression of the delta-9 desaturases FAT-5/-6/-7, and thus regulates fatty acid metabolism; NHR-80 is fully required for any expression of FAT-7, full expression of FAT-5/-6, viability in the absence of FAT-6, and transcriptional hyperactivation of fat-7 in the absence of FAT-6, and for a fully normal adult lifespan; nhr-80 is expressed robustly in the intestine during larval and adult stages of development, with some expression also seen in head muscles; nhr-80 is specific to nematodes, being a divergent ortholog of HNF4 with many paralogs in C. elegans; nhr-80(tm1011) mutants, like nhr-49 mutants, have an increased ration of saturated 18:0 fatty acids to monounsaturated 18:1 ones (4.6 instead of 2.2); nhr-80(tm1011) mutants are viable and fertile and have no increase in fat storage, but double fat-6(tm331);nhr-80(tm1011) mutants, (or fat-6(tm331) mutants subjected to nhr-80(RNAi), are synthetically lethal unless cultured on media supplemented with desaturated fatty acids.


Orthologs of daf-9;glp-1;nhr-80 in SynergyAge
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Orthologs of daf-9 in SynergyAge
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Orthologs of glp-1 in SynergyAge
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Species Gene
Orthologs of nhr-80 in SynergyAge
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About

SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.

Read more about SynergyAge database

How to cite us

If you would like to cite this database please use:

Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z

Contact
Robi Tacutu, Ph.D.
Head: Systems Biology of Aging Group, Bioinformatics & Structural Biochemistry Department
Institute of Biochemistry, Ground floor
Splaiul Independentei 296, Bucharest, Romania
Email:

Group webpage: www.aging-research.group