Lifespan changes: From wild type to glp-1;nhr-80 / From glp-1;nhr-80 to multiple mutants
20
HT115
37.5
108.33%
The nhr-80 transgene fails to extend the lifespan of wild type animals, but increases the mean lifespan of glp-1(e2141ts) mutant animals by 80%
Double mutant glp-1(e2141ts);nhr-80(OE) has a lifespan of 37.5 days, while single mutant glp-1(e2141ts) has a lifespan of 23.5 days, single mutant nhr-80(OE) has a lifespan of 20.0 days and wild type has a lifespan of 18.0 days.
Synergistic (positive)
Goudeau J et al., 2011, Fatty acid desaturation links germ cell loss to longevity through NHR-80/HNF4 in C. elegans. PLoS Biol. 9(3):e1000599 21423649 Click here to select all mutants from this PubMed ID in the graph
20
HT115
42.0
127.03%
The nhr-80 transgene fails to extend the lifespan of wild type animals, but increases the mean lifespan of glp-1(e2141ts) mutant animals by 80%
Double mutant glp-1(e2141ts);nhr-80(OE) has a lifespan of 42.0 days, while single mutant glp-1(e2141ts) has a lifespan of 24.0 days, single mutant nhr-80(OE) has a lifespan of 17.5 days and wild type has a lifespan of 18.5 days.
Enhancer, opposite lifespan effects
Goudeau J et al., 2011, Fatty acid desaturation links germ cell loss to longevity through NHR-80/HNF4 in C. elegans. PLoS Biol. 9(3):e1000599 21423649 Click here to select all mutants from this PubMed ID in the graph
20
HT115
12.5
nhr-80 RNAi suppresses the lifespan of glp-1(e2141ts) mutant animals
Double mutant glp-1(e2141ts);nhr-80(RNAi) has a lifespan of 12.5 days, while single mutant glp-1(e2141ts) has a lifespan of 26.5 days.
Goudeau J et al., 2011, Fatty acid desaturation links germ cell loss to longevity through NHR-80/HNF4 in C. elegans. PLoS Biol. 9(3):e1000599 21423649 Click here to select all mutants from this PubMed ID in the graph
20
HT115
10.5
nhr-80 RNAi suppresses the lifespan of glp-1(e2141ts) mutant animals
Double mutant glp-1(e2141ts);nhr-80(RNAi) has a lifespan of 10.5 days, while single mutant glp-1(e2141ts) has a lifespan of 20.0 days.
Contains dependence
Goudeau J et al., 2011, Fatty acid desaturation links germ cell loss to longevity through NHR-80/HNF4 in C. elegans. PLoS Biol. 9(3):e1000599 21423649 Click here to select all mutants from this PubMed ID in the graph
20
HT115
11.5
Although the nhr-80(tm1011) allele does not affect the lifespan of wild type animals, it fully suppresses that of glp-1(e2141ts)mutants.
Double mutant glp-1(e2141ts);nhr-80(tm1011) has a lifespan of 11.5 days, while single mutant glp-1(e2141ts) has a lifespan of 20.0 days.
Contains dependence
Goudeau J et al., 2011, Fatty acid desaturation links germ cell loss to longevity through NHR-80/HNF4 in C. elegans. PLoS Biol. 9(3):e1000599 21423649 Click here to select all mutants from this PubMed ID in the graph
20
HT115
12.5
-24.24%
Although the nhr-80(tm1011) allele does not affect the lifespan of wild type animals, it fully suppresses that of glp-1(e2141ts)mutants.
Double mutant glp-1(e2141ts);nhr-80(tm1011) has a lifespan of 12.5 days, while single mutant glp-1(e2141ts) has a lifespan of 20.0 days, single mutant nhr-80(tm1011) has a lifespan of 15.0 days and wild type has a lifespan of 16.5 days.
Contains dependence
Goudeau J et al., 2011, Fatty acid desaturation links germ cell loss to longevity through NHR-80/HNF4 in C. elegans. PLoS Biol. 9(3):e1000599 21423649 Click here to select all mutants from this PubMed ID in the graph
20
HT115
11.0
Double mutant glp-1(e2141ts);nhr-80(tm1011) has a lifespan of 11.0 days, while single mutant glp-1(e2141ts) has a lifespan of 25.0 days.
Goudeau J et al., 2011, Fatty acid desaturation links germ cell loss to longevity through NHR-80/HNF4 in C. elegans. PLoS Biol. 9(3):e1000599 21423649 Click here to select all mutants from this PubMed ID in the graph
20
HT115
10.0
Double mutant glp-1(e2141ts);nhr-80(tm1011) has a lifespan of 10.0 days, while single mutant glp-1(e2141ts) has a lifespan of 20.0 days.
Contains dependence
Goudeau J et al., 2011, Fatty acid desaturation links germ cell loss to longevity through NHR-80/HNF4 in C. elegans. PLoS Biol. 9(3):e1000599 21423649 Click here to select all mutants from this PubMed ID in the graph
Protein glp-1
Locus: CELE_F02A9.6
Wormbase description: glp-1 encodes an N-glycosylated transmembrane protein that, along with LIN-12, comprises one of two C. elegans members of the LIN-12/Notch family of receptors; from the N- to the C-terminus, GLP-1 is characterized by ten extracellular EGF-like repeats, three LIN-12/Notch repeats, a CC-linker, a transmembrane domain, a RAM domain, six intracellular ankyrin repeats, and a PEST sequence; in C. elegans, GLP-1 activity is required for cell fate specification in germline and somatic tissues; in the germline, GLP-1, acting as a receptor for the DSL family ligand LAG-2, is essential for mitotic proliferation of germ cells and maintenance of germline stem cells; in somatic tissues, maternally provided GLP-1, acting as a receptor for the DSL family ligand APX-1, is required for inductive interactions that specify the fates of certain embryonic blastomeres; GLP-1 is also required for some later embryonic cell fate decisions, and in these decisions its activity is functionally redundant with that of LIN-12; GLP-1 expression is regulated temporally and spatially via translational control, as GLP-1 mRNA, present ubiquitously in the germline and embryo, yields detectable protein solely in lateral, interior, and endomembranes of distal, mitotic germ cells, and then predominantly in the AB blastomere and its descendants in the early embryo; proper spatial translation of glp-1 mRNA in the embryo is dependent upon genes such as the par genes, that are required for normal anterior-posterior asymmetry in the early embryo; signaling through GLP-1 controls the activity of the downstream Notch pathway components LAG-3 and LAG-1, the latter being predicted to function as part of a transcriptional feedback mechanism that positively regulates GLP-1 expression; signaling through the DNA-binding protein LAG-1 is believed to involve a direct interaction between LAG-1 and the GLP-1 RAM and ankyrin domains
Nuclear Hormone Receptor family
Locus: CELE_H10E21.3
Wormbase description: nhr-80 encodes a nuclear hormone receptor, expressed in the intestine, that regulates expression of the delta-9 desaturases FAT-5/-6/-7, and thus regulates fatty acid metabolism; NHR-80 is fully required for any expression of FAT-7, full expression of FAT-5/-6, viability in the absence of FAT-6, and transcriptional hyperactivation of fat-7 in the absence of FAT-6, and for a fully normal adult lifespan; nhr-80 is expressed robustly in the intestine during larval and adult stages of development, with some expression also seen in head muscles; nhr-80 is specific to nematodes, being a divergent ortholog of HNF4 with many paralogs in C. elegans; nhr-80(tm1011) mutants, like nhr-49 mutants, have an increased ration of saturated 18:0 fatty acids to monounsaturated 18:1 ones (4.6 instead of 2.2); nhr-80(tm1011) mutants are viable and fertile and have no increase in fat storage, but double fat-6(tm331);nhr-80(tm1011) mutants, (or fat-6(tm331) mutants subjected to nhr-80(RNAi), are synthetically lethal unless cultured on media supplemented with desaturated fatty acids.
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SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.
If you would like to cite this database please use:
Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z
Group webpage: www.aging-research.group