isp-1;smk-1

Lifespan changes: From wild type to isp-1;smk-1

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Genetic mutants with isp-1, smk-1 alterations

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    20

  • Lifespan (days)

    26.1

  • Lifespan change (compared to wild type)

    42.62%

  • Phenotype

     We found that smk-1 RNAi only slightly suppressed the extended life span of animals with compromised complex III activity, i.e., the cyc-1 RNAi-treated animals and isp-1(qm150) mutant animals

  • Lifespan comparisons

    Double mutant isp-1(qm150);smk-1RNAi has a lifespan of 26.1 days, while single mutant isp-1(qm150) has a lifespan of 32.8 days and wild type has a lifespan of 18.3 days.

  • Type of interaction
    See methods

    Contains dependence

  • Citation
    View abstract

    Wolff S et al., 2006, SMK-1, an essential regulator of DAF-16-mediated longevity. Cell. 124(5):1039-53 PubMed 16530049 Click here to select all mutants from this PubMed ID in the graph

Search genes: isp-1 smk-1
  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Cytochrome b-c1 complex subunit Rieske, mitochondrial


Locus: CELE_F42G8.12


Wormbase description: isp-1 encodes a Rieske iron sulphur protein (ISP) which is a subunit of the mitochondrial complex III in the mitochondrial membrane; the subunits are highly conserved in all mitochondria and aerobic bacteria; mitochondrial complex III catalyses electron transport from ubiquinol to cytochrome c; isp-1 mutants show low oxygen consumption, a decreased sensitivity to reactive oxygen species and increased lifespan suggesting that mitochondrial electron transport is a key factor affecting life span; isp-1 affects the rates of physiological processes like reproduction and development and also affects behavior.


  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

SMEK (Dictyostelium Suppressor of MEK null) homolog


Locus: CELE_F41E6.4


Wormbase description: smk-1 encodes a novel, evolutionarily conserved protein that is orthologous to the mammalian and Dictyostelium discoideum SMEK (suppressor of MEK null) proteins; smk-1 activity is essential for several aspects of DAF-16-mediated longevity namely, the defense response to pathogenic bacteria and increased resistance to oxidative and UV-induced damage; in regulating DAF-16 activity, SMK-1 appears to act by affecting the transcription of DAF-16 target genes, such as sod-3, ctl-1, and lys-8; SMK-1 is present in the nucleus of intestinal cells, many head and tail neurons, and some hypodermal cells throughout development.


Orthologs of isp-1;smk-1 in SynergyAge
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Orthologs of isp-1 in SynergyAge
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Orthologs of smk-1 in SynergyAge
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About

SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.

Read more about SynergyAge database

How to cite us

If you would like to cite this database please use:

Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z

Contact
Robi Tacutu, Ph.D.
Head: Systems Biology of Aging Group, Bioinformatics & Structural Biochemistry Department
Institute of Biochemistry, Ground floor
Splaiul Independentei 296, Bucharest, Romania
Email:

Group webpage: www.aging-research.group