Lifespan changes: From wild type to pha-4;wwp-1
20
HT115
17.5
-6.42%
RNAi reduction of pha-4 suppressed the increased longevity of worms overexpressing wwp-1
Double mutant pha-4(RNAi);wwp-1(OE) has a lifespan of 17.5 days, while single mutant pha-4(RNAi) has a lifespan of 16.7 days, single mutant wwp-1(OE) has a lifespan of 23.1 days and wild type has a lifespan of 18.7 days.
Opposite lifespan effects of single mutants
Carrano AC et al., 2009, A conserved ubiquitination pathway determines longevity in response to diet restriction. Nature. 460(7253):396-9 19553937 Click here to select all mutants from this PubMed ID in the graph
20
HT115
16.4
-12.30%
RNAi reduction of pha-4 suppressed the increased longevity of worms overexpressing wwp-1
Double mutant pha-4(RNAi);wwp-1(OE) has a lifespan of 16.4 days, while single mutant pha-4(RNAi) has a lifespan of 15.6 days, single mutant wwp-1(OE) has a lifespan of 21.1 days and wild type has a lifespan of 18.7 days.
Opposite lifespan effects of single mutants
Carrano AC et al., 2009, A conserved ubiquitination pathway determines longevity in response to diet restriction. Nature. 460(7253):396-9 19553937 Click here to select all mutants from this PubMed ID in the graph
20
HT115
17.1
-8.56%
RNAi reduction of pha-4 suppressed the increased longevity of worms overexpressing wwp-1
Double mutant pha-4(RNAi);wwp-1(OE) has a lifespan of 17.1 days, while single mutant pha-4(RNAi) has a lifespan of 16.3 days, single mutant wwp-1(OE) has a lifespan of 21.5 days and wild type has a lifespan of 18.7 days.
Opposite lifespan effects of single mutants
Carrano AC et al., 2009, A conserved ubiquitination pathway determines longevity in response to diet restriction. Nature. 460(7253):396-9 19553937 Click here to select all mutants from this PubMed ID in the graph
Defective pharyngeal development protein 4
Locus: CELE_F38A6.1
Wormbase description: pha-4 encodes a FoxA transcription factor; during embryonic development, PHA-4 functions as an organ identity gene whose activity is necessary and sufficient for development of the pharynx/foregut; in addition, PHA-4 plays a key role in regulation of diet-restriction-induced longevity in adult animals; PHA-4 expression begins early in embryogenesis and is seen in pharyngeal and intestinal cells (foregut and midgut); PHA-4 is also expressed later in the developing somatic gonad.
E3 ubiquitin-protein ligase;WW domain Protein (E3 ubiquitin ligase)
Locus: CELE_Y65B4BR.4
Wormbase description: wwp-1 encodes, by alternative splicing, two isoforms of a putative E3 ubiquitin ligase orthologous to budding yeast Rsp5, Drosophila SU(DX), and human WWP1 (OMIM:602307) and WWP2 (OMIM:602308); WWP-1 is required for proteolysis of the intracellular LIN-12 domain in primary ventral precursor cells, and for protection of germ cells against ionizing radiation or camptothecin, as well as for normal acetylcholine neurotransmission, axonal guidance and fasciculation, patterning of the ventral nerve cord, locomotion, fat content, and late embryonic morphogenesis; in UV-irradiated nondauer larvae, WWP-1 stimulates the proteolysis of AMA-1; although WWP-1's is normally blocked from fully activating AMA-1 proteolysis by XPA-1/RAD-3, it also cooperates with XPA-1/RAD-3 to protect worms from UV-irradiation; WWP-1 is expressed in many neurons (cholinergic and GABAergic motor neurons, head, tail, body, and nerve cords), in larval and adult pharynx, intestine, renal gland cells and rectal epithelium, and in adult vulval muscle, body wall muscle, and coelomocytes; WWP-1 contains an N-terminal C2 domain, four central WW repeats and a C-terminal HECT ubiquitin ligase domain; WWP-1 binds UBC-18 in yeast two-hybrid assays, but is not required for UBC-18's activity in pharyngeal development.
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SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.
If you would like to cite this database please use:
Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z
Group webpage: www.aging-research.group