mekk-3;pha-4;smg-1

Lifespan changes: From wild type to mekk-3;pha-4;smg-1

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Genetic mutants with mekk-3, pha-4, smg-1 alterations

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    15

  • Lifespan (days)

    27.84

  • Lifespan comparisons

    Triple mutant mekk-3(RNAi);pha-4(zu225);smg-1(cc546) has a lifespan of 27.84 days, while double mutant pha-4(zu225);smg-1(cc546) has a lifespan of 25.94 days.

  • Citation
    View abstract

    Chamoli M et al., 2014, A novel kinase regulates dietary restriction-mediated longevity in Caenorhabditis elegans. Aging Cell. 13(4):641-55 PubMed 24655420 Click here to select all mutants from this PubMed ID in the graph

  • Temperature °C

    15

  • Lifespan (days)

    29.08

  • Lifespan comparisons

    Triple mutant mekk-3(RNAi);pha-4(zu225);smg-1(cc546) has a lifespan of 29.08 days, while double mutant pha-4(zu225);smg-1(cc546) has a lifespan of 29.52 days.

  • Citation
    View abstract

    Chamoli M et al., 2014, A novel kinase regulates dietary restriction-mediated longevity in Caenorhabditis elegans. Aging Cell. 13(4):641-55 PubMed 24655420 Click here to select all mutants from this PubMed ID in the graph

Search genes: mekk-3 pha-4 smg-1 mekk-3;pha-4;smg-1
  • Symbol
  • GenAge

No gene information for mekk-3


  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Defective pharyngeal development protein 4


Locus: CELE_F38A6.1


Wormbase description: pha-4 encodes a FoxA transcription factor; during embryonic development, PHA-4 functions as an organ identity gene whose activity is necessary and sufficient for development of the pharynx/foregut; in addition, PHA-4 plays a key role in regulation of diet-restriction-induced longevity in adult animals; PHA-4 expression begins early in embryogenesis and is seen in pharyngeal and intestinal cells (foregut and midgut); PHA-4 is also expressed later in the developing somatic gonad.


  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Serine/threonine-protein kinase smg-1


Locus: CELE_C48B6.6


Wormbase description: smg-1 encodes a phosphatidylinositol kinase-related protein kinase; SMG-1 functions as a key component of the nonsense-mediated mRNA decay (NMD) pathway that identifies and degrades mRNAs that contain premature stop codons; in addition, and partially in parallel to DAF-2-insulin signaling, SMG-1 regulates adult lifespan and the response to oxidative stress; in vitro, SMG-1 is capable of phosphorylating SMG-2/UPF1, an RNA helicase whose activity is also required for NMD and with which SMG-1 coimmunoprecipitates from crude extracts.


Orthologs of mekk-3;pha-4;smg-1 in SynergyAge
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Orthologs of mekk-3 in SynergyAge
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Species Gene
Orthologs of pha-4 in SynergyAge
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Species Gene
Orthologs of smg-1 in SynergyAge
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About

SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.

Read more about SynergyAge database

How to cite us

If you would like to cite this database please use:

Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z

Contact
Robi Tacutu, Ph.D.
Head: Systems Biology of Aging Group, Bioinformatics & Structural Biochemistry Department
Institute of Biochemistry, Ground floor
Splaiul Independentei 296, Bucharest, Romania
Email:

Group webpage: www.aging-research.group