Lifespan changes: From wild type to daf-16;trpa-1
25
NGM
11.31
Upon daf-16 RNAi treatment, trpa-1 and pkc-2 mutant worms showed a lifespan similar to that of wild-type worms at all three different temperatures.
Double mutant daf-16(RNAi);trpa-1(ok999) has a lifespan of 11.31 days, while single mutant trpa-1(ok999) has a lifespan of 11.31 days and single mutant daf-16(RNAi) has a lifespan of 11.31 days.
Xiao R et al., 2013, A genetic program promotes C. elegans longevity at cold temperatures via a thermosensitive TRP channel. Cell. 152(4):806-17 23415228 Click here to select all mutants from this PubMed ID in the graph
20
NGM
13.82
Upon daf-16 RNAi treatment, trpa-1 and pkc-2 mutant worms showed a lifespan similar to that of wild-type worms at all three different temperatures.
Double mutant daf-16(RNAi);trpa-1(ok999) has a lifespan of 13.82 days, while single mutant trpa-1(ok999) has a lifespan of 13.82 days and single mutant daf-16(RNAi) has a lifespan of 13.82 days.
Xiao R et al., 2013, A genetic program promotes C. elegans longevity at cold temperatures via a thermosensitive TRP channel. Cell. 152(4):806-17 23415228 Click here to select all mutants from this PubMed ID in the graph
15
NGM
18.0
Upon daf-16 RNAi treatment, trpa-1 and pkc-2 mutant worms showed a lifespan similar to that of wild-type worms at all three different temperatures.
Double mutant daf-16(RNAi);trpa-1(ok999) has a lifespan of 18.0 days, while single mutant trpa-1(ok999) has a lifespan of 18.0 days and single mutant daf-16(RNAi) has a lifespan of 18.0 days.
Xiao R et al., 2013, A genetic program promotes C. elegans longevity at cold temperatures via a thermosensitive TRP channel. Cell. 152(4):806-17 23415228 Click here to select all mutants from this PubMed ID in the graph
20
NGM
15.8
-15.51%
Loss of daf-16 abolished the ability of trpa-1 transgenes to extend lifespan.
Double mutant daf-16(mgDf47);trpa-1(xuEx601) has a lifespan of 15.8 days, while single mutant daf-16(mgDf47) has a lifespan of 16.0 days, single mutant trpa-1(xuEx601) has a lifespan of 23.8 days and wild type has a lifespan of 18.7 days.
Opposite lifespan effects of single mutants
Xiao R et al., 2013, A genetic program promotes C. elegans longevity at cold temperatures via a thermosensitive TRP channel. Cell. 152(4):806-17 23415228 Click here to select all mutants from this PubMed ID in the graph
20
NGM
20.2
-11.40%
Loss of daf-16 abolished the ability of trpa-1 transgenes to extend lifespan.
Double mutant daf-16(mgDf47);trpa-1(xuEx601) has a lifespan of 20.2 days, while single mutant daf-16(mgDf47) has a lifespan of 19.4 days, single mutant trpa-1(xuEx601) has a lifespan of 25.0 days and wild type has a lifespan of 22.8 days.
Opposite lifespan effects of single mutants
Xiao R et al., 2013, A genetic program promotes C. elegans longevity at cold temperatures via a thermosensitive TRP channel. Cell. 152(4):806-17 23415228 Click here to select all mutants from this PubMed ID in the graph
20
NGM
16.0
-14.44%
Loss of daf-16 abolished the ability of trpa-1 transgenes to extend lifespan.
Double mutant daf-16(mgDf47);trpa-1(xuEx606) has a lifespan of 16.0 days, while single mutant daf-16(mgDf47) has a lifespan of 16.0 days, single mutant trpa-1(xuEx606) has a lifespan of 21.1 days and wild type has a lifespan of 18.7 days.
Opposite lifespan effects of single mutants
Xiao R et al., 2013, A genetic program promotes C. elegans longevity at cold temperatures via a thermosensitive TRP channel. Cell. 152(4):806-17 23415228 Click here to select all mutants from this PubMed ID in the graph
Forkhead box protein O;hypothetical protein
Locus: CELE_R13H8.1
Wormbase description: daf-16 encodes the sole C. elegans forkhead box O (FOXO) homologue; DAF-16 functions as a transcription factor that acts in the insulin/IGF-1-mediated signaling (IIS) pathway that regulates dauer formation, longevity, fat metabolism, stress response, and innate immunity; DAF-16 regulates these various processes through isoform-specific expression, isoform-specific regulation by different AKT kinases, and differential regulation of target genes; DAF-16 can interact with the CBP-1 transcription cofactor in vitro, and interacts genetically with other genes in the insulin signaling and with daf-12, which encodes a nuclear hormone receptor; DAF-16 is activated in response to DNA damage during development and co-regulated by EGL-27, alleviates DNA-damage-induced developmental arrest by inducing DAF-16-associated element (DAE)-regulated genes; DAF-16 is broadly expressed but displays isoform-specific tissue enrichment; DAF-16 localizes to both the cytoplasm and the nucleus, with the ratio between the two an important regulator of function.
TRPA cation channel homolog;Transient receptor potential cation channel subfamily A member 1 homolog
Locus: CELE_C29E6.2
Wormbase description: trpa-1 encodes a transient receptor potential (TRP) ion channel orthologous to the vertebrate and Drosophila TRPA1 channels; in C. elegans, trpa-1 activity is required for specific mechanosensory behaviors such as nose-touch avoidance and touch-mediated foraging; when expressed in mammalian cells, TRPA-1 exhibits channel activity in response to mechanical stimulation; TRPA-1::GFP reporters are expressed in a number of different cell types including sensory neurons, muscle, and epithelial cells.
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SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.
If you would like to cite this database please use:
Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z
Group webpage: www.aging-research.group