cmk-1;trpa-1

Lifespan changes: From wild type to cmk-1;trpa-1

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Genetic mutants with cmk-1, trpa-1 alterations

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    20

  • Diet

    NGM

  • Lifespan (days)

    24.28

  • Lifespan change (compared to wild type)

    58.18%

  • Phenotype

    trpa-1 transgene can further extend the lifespan of cmk-1mutant worms.

  • Lifespan comparisons

    Double mutant cmk-1(oy21);trpa-1(xuEx601) has a lifespan of 24.28 days, while single mutant trpa-1(xuEx601) has a lifespan of 22.85 days, single mutant cmk-1(oy21) has a lifespan of 16.42 days and wild type has a lifespan of 15.35 days.

  • Type of interaction
    See methods

    Synergistic (positive)

  • Citation
    View abstract

    Xiao R et al., 2013, A genetic program promotes C. elegans longevity at cold temperatures via a thermosensitive TRP channel. Cell. 152(4):806-17 PubMed 23415228 Click here to select all mutants from this PubMed ID in the graph

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    20

  • Diet

    NGM

  • Lifespan (days)

    22.85

  • Lifespan change (compared to wild type)

    48.86%

  • Phenotype

    trpa-1 transgene can further extend the lifespan of cmk-1mutant worms.

  • Lifespan comparisons

    Double mutant cmk-1(oy21);trpa-1(xuEx619) has a lifespan of 22.85 days, while single mutant trpa-1(xuEx619) has a lifespan of 23.92 days, single mutant cmk-1(oy21) has a lifespan of 16.42 days and wild type has a lifespan of 15.35 days.

  • Type of interaction
    See methods

    Dependent

  • Citation
    View abstract

    Xiao R et al., 2013, A genetic program promotes C. elegans longevity at cold temperatures via a thermosensitive TRP channel. Cell. 152(4):806-17 PubMed 23415228 Click here to select all mutants from this PubMed ID in the graph

Search genes: cmk-1 trpa-1
  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Calcium/calmodulin-dependent protein kinase type 1


Locus: CELE_K07A9.2


Wormbase description: cmk-1 encodes a Ca+2/calmodulin-dependent protein kinase I (CaMK1); CMK-1 activity is required, cell autonomously and downstream of the cyclic nucleotide-gated channel TAX-4, for several aspects of AFD thermosensory neuron differentiation, including expression of the gcy-8 guanylyl cyclase and nhr-38 nuclear hormone receptor genes and morphology of the AFD sensory endings; cmk-1 activity is thus also required for normal thermosensory behavior; when expressed in COS-7 cells, CMK-1 and CKK-1 positively regulate the transcriptional activity of endogenous CREB; a cmk-1::gfp reporter is expressed in head sensory and interneurons as well as in the ventral nerve cord; expression is seen specifically in the neurons of the thermosensory circuit, AFD, AIY, and AIZ; in the AFD neurons, CMK-1 localizes exclusively to the cytoplasm, however when expressed in COS-7 cells, CMK-1 is seen in the nucleus.


  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

TRPA cation channel homolog;Transient receptor potential cation channel subfamily A member 1 homolog


Locus: CELE_C29E6.2


Wormbase description: trpa-1 encodes a transient receptor potential (TRP) ion channel orthologous to the vertebrate and Drosophila TRPA1 channels; in C. elegans, trpa-1 activity is required for specific mechanosensory behaviors such as nose-touch avoidance and touch-mediated foraging; when expressed in mammalian cells, TRPA-1 exhibits channel activity in response to mechanical stimulation; TRPA-1::GFP reporters are expressed in a number of different cell types including sensory neurons, muscle, and epithelial cells.


Orthologs of cmk-1;trpa-1 in SynergyAge
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Orthologs of cmk-1 in SynergyAge
Show in SynergyAge
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Orthologs of trpa-1 in SynergyAge
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Species Gene
About

SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.

Read more about SynergyAge database

How to cite us

If you would like to cite this database please use:

Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z

Contact
Robi Tacutu, Ph.D.
Head: Systems Biology of Aging Group, Bioinformatics & Structural Biochemistry Department
Institute of Biochemistry, Ground floor
Splaiul Independentei 296, Bucharest, Romania
Email:

Group webpage: www.aging-research.group