Lifespan changes: From wild type to cmk-1;trpa-1
20
NGM
24.28
58.18%
trpa-1 transgene can further extend the lifespan of cmk-1mutant worms.
Double mutant cmk-1(oy21);trpa-1(xuEx601) has a lifespan of 24.28 days, while single mutant trpa-1(xuEx601) has a lifespan of 22.85 days, single mutant cmk-1(oy21) has a lifespan of 16.42 days and wild type has a lifespan of 15.35 days.
Synergistic (positive)
Xiao R et al., 2013, A genetic program promotes C. elegans longevity at cold temperatures via a thermosensitive TRP channel. Cell. 152(4):806-17 23415228 Click here to select all mutants from this PubMed ID in the graph
20
NGM
22.85
48.86%
trpa-1 transgene can further extend the lifespan of cmk-1mutant worms.
Double mutant cmk-1(oy21);trpa-1(xuEx619) has a lifespan of 22.85 days, while single mutant trpa-1(xuEx619) has a lifespan of 23.92 days, single mutant cmk-1(oy21) has a lifespan of 16.42 days and wild type has a lifespan of 15.35 days.
Dependent
Xiao R et al., 2013, A genetic program promotes C. elegans longevity at cold temperatures via a thermosensitive TRP channel. Cell. 152(4):806-17 23415228 Click here to select all mutants from this PubMed ID in the graph
Calcium/calmodulin-dependent protein kinase type 1
Locus: CELE_K07A9.2
Wormbase description: cmk-1 encodes a Ca+2/calmodulin-dependent protein kinase I (CaMK1); CMK-1 activity is required, cell autonomously and downstream of the cyclic nucleotide-gated channel TAX-4, for several aspects of AFD thermosensory neuron differentiation, including expression of the gcy-8 guanylyl cyclase and nhr-38 nuclear hormone receptor genes and morphology of the AFD sensory endings; cmk-1 activity is thus also required for normal thermosensory behavior; when expressed in COS-7 cells, CMK-1 and CKK-1 positively regulate the transcriptional activity of endogenous CREB; a cmk-1::gfp reporter is expressed in head sensory and interneurons as well as in the ventral nerve cord; expression is seen specifically in the neurons of the thermosensory circuit, AFD, AIY, and AIZ; in the AFD neurons, CMK-1 localizes exclusively to the cytoplasm, however when expressed in COS-7 cells, CMK-1 is seen in the nucleus.
TRPA cation channel homolog;Transient receptor potential cation channel subfamily A member 1 homolog
Locus: CELE_C29E6.2
Wormbase description: trpa-1 encodes a transient receptor potential (TRP) ion channel orthologous to the vertebrate and Drosophila TRPA1 channels; in C. elegans, trpa-1 activity is required for specific mechanosensory behaviors such as nose-touch avoidance and touch-mediated foraging; when expressed in mammalian cells, TRPA-1 exhibits channel activity in response to mechanical stimulation; TRPA-1::GFP reporters are expressed in a number of different cell types including sensory neurons, muscle, and epithelial cells.
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SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.
If you would like to cite this database please use:
Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z
Group webpage: www.aging-research.group