Lifespan changes: From wild type to pkc-2;trpa-1
15
NGM
22.81
-16.08%
The short-lived phenotype of pkc-2; trpa-1double mutant at low temperatures is similar to that of trpa-1 and pkc-2 single mutants, showing that the effect of these two genes on lifespan is not additive. This provides additional evidence that TRPA-1 and PKC-2 act in the same pathway.
Double mutant pkc-2(ok328);trpa-1(ok999) has a lifespan of 22.81 days, while single mutant pkc-2(ok328) has a lifespan of 22.81 days, single mutant trpa-1(ok999) has a lifespan of 23.75 days and wild type has a lifespan of 27.18 days.
Dependent
Xiao R et al., 2013, A genetic program promotes C. elegans longevity at cold temperatures via a thermosensitive TRP channel. Cell. 152(4):806-17 23415228 Click here to select all mutants from this PubMed ID in the graph
20
NGM
16.0
-20.00%
The short-lived phenotype of pkc-2; trpa-1double mutant is similar to that of trpa-1 and pkc-2 single mutants, showing that the effect of these two genes on lifespan is not additive. This provides additional evidence that TRPA-1 and PKC-2 act in the same pathway.
Double mutant pkc-2(ok328);trpa-1(ok999) has a lifespan of 16.0 days, while single mutant pkc-2(ok328) has a lifespan of 17.5 days, single mutant trpa-1(ok999) has a lifespan of 17.0 days and wild type has a lifespan of 20.0 days.
Almost additive (negative)
Xiao R et al., 2013, A genetic program promotes C. elegans longevity at cold temperatures via a thermosensitive TRP channel. Cell. 152(4):806-17 23415228 Click here to select all mutants from this PubMed ID in the graph
25
NGM
13.95
-2.92%
The short-lived phenotype of pkc-2; trpa-1double mutant is similar to that of trpa-1 and pkc-2 single mutants, showing that the effect of these two genes on lifespan is not additive. This provides additional evidence that TRPA-1 and PKC-2 act in the same pathway.
Double mutant pkc-2(ok328);trpa-1(ok999) has a lifespan of 13.95 days, while single mutant pkc-2(ok328) has a lifespan of 13.95 days, single mutant trpa-1(ok999) has a lifespan of 15.2 days and wild type has a lifespan of 14.37 days.
Opposite lifespan effects of single mutants
Xiao R et al., 2013, A genetic program promotes C. elegans longevity at cold temperatures via a thermosensitive TRP channel. Cell. 152(4):806-17 23415228 Click here to select all mutants from this PubMed ID in the graph
20
NGM
19.7
Loss of pkc-2 fully suppresses the long-lived phenotype of trpa-1 transgenic worms.
Double mutant pkc-2(ok328);trpa-1(xuEx601) has a lifespan of 19.7 days, while single mutant trpa-1(xuEx601) has a lifespan of 23.9 days and single mutant pkc-2(ok328) has a lifespan of 19.2 days.
Xiao R et al., 2013, A genetic program promotes C. elegans longevity at cold temperatures via a thermosensitive TRP channel. Cell. 152(4):806-17 23415228 Click here to select all mutants from this PubMed ID in the graph
20
NGM
18.7
Loss of pkc-2 fully suppresses the long-lived phenotype of trpa-1 transgenic worms.
Double mutant pkc-2(ok328);trpa-1(xuEx601) has a lifespan of 18.7 days, while single mutant trpa-1(xuEx601) has a lifespan of 21.6 days and single mutant pkc-2(ok328) has a lifespan of 18.5 days.
Xiao R et al., 2013, A genetic program promotes C. elegans longevity at cold temperatures via a thermosensitive TRP channel. Cell. 152(4):806-17 23415228 Click here to select all mutants from this PubMed ID in the graph
20
NGM
19.3
Loss of pkc-2 fully suppresses the long-lived phenotype of trpa-1 transgenic worms.
Double mutant pkc-2(ok328);trpa-1(xuEx619) has a lifespan of 19.3 days, while single mutant trpa-1(xuEx619) has a lifespan of 22.1 days and single mutant pkc-2(ok328) has a lifespan of 18.5 days.
Xiao R et al., 2013, A genetic program promotes C. elegans longevity at cold temperatures via a thermosensitive TRP channel. Cell. 152(4):806-17 23415228 Click here to select all mutants from this PubMed ID in the graph
20
NGM
25.33
35.74%
pkc-2 transgene can fully suppress the short-lived phenotype of trpa-1 mutant worms, consistent with the model that PKC-2 acts downstream of TRPA-1.
Double mutant pkc-2(xuEx913);trpa-1(ok999) has a lifespan of 25.33 days, while single mutant pkc-2(xuEx913) has a lifespan of 25.33 days, single mutant trpa-1(ok999) has a lifespan of 17.3 days and wild type has a lifespan of 18.66 days.
Opposite lifespan effects of single mutants
Xiao R et al., 2013, A genetic program promotes C. elegans longevity at cold temperatures via a thermosensitive TRP channel. Cell. 152(4):806-17 23415228 Click here to select all mutants from this PubMed ID in the graph
Protein kinase C;Protein kinase C-like 2
Locus: CELE_E01H11.1
Wormbase description: pkc-2 encodes protein kinases similar to the classical protein kinase C family of Ca2+/diacylglycerol-stimulated kinases; when expressed in insect cells, one PKC-2 isoform exhibits Ca2+-dependent serine phosphorylation; PKC-2 isoforms are expressed in neurons, the intestine, muscles cells, and the somatic distal gonad, including the spermatheca; in neurons, PKC-2 localizes to the cell body and to neuronal processes; PKC-2 is expressed at low levels in embryos, with expression increasing 10-fold during the L1 larval stage, and then continuing at lower levels throughout post-embryonic development; fractionation experiments indicate that in young adults and mid-L1 and L2 larvae, PKC-2 isoforms are nearly evenly distributed between the cytosol and organelles and/or the cytoskeleton; in egg-laying adults, approximately 70% of PKC-2 is found in the cytosol.
TRPA cation channel homolog;Transient receptor potential cation channel subfamily A member 1 homolog
Locus: CELE_C29E6.2
Wormbase description: trpa-1 encodes a transient receptor potential (TRP) ion channel orthologous to the vertebrate and Drosophila TRPA1 channels; in C. elegans, trpa-1 activity is required for specific mechanosensory behaviors such as nose-touch avoidance and touch-mediated foraging; when expressed in mammalian cells, TRPA-1 exhibits channel activity in response to mechanical stimulation; TRPA-1::GFP reporters are expressed in a number of different cell types including sensory neurons, muscle, and epithelial cells.
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SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.
If you would like to cite this database please use:
Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z
Group webpage: www.aging-research.group