daf-16;sea-2

Lifespan changes: From wild type to daf-16;sea-2 / From daf-16;sea-2 to multiple mutants

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Genetic mutants with daf-16, sea-2 alterations

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    20

  • Lifespan (days)

    12.1

  • Lifespan change (compared to wild type)

    -30.06%

  • Phenotype

    sea-2 mutants have extended lifespan. The long-lived phenotype of sea-2 is suppressed by loss of function of daf-16.

  • Lifespan comparisons

    Double mutant daf-16(mu86);sea-2(bp283) has a lifespan of 12.1 days, while single mutant daf-16(mu86) has a lifespan of 12.7 days, single mutant sea-2(bp283) has a lifespan of 20.1 days and wild type has a lifespan of 17.3 days.

  • Type of interaction
    See methods

    Opposite lifespan effects of single mutants

  • Citation
    View abstract

    Huang X et al., 2011, The zinc-finger protein SEA-2 regulates larval developmental timing and adult lifespan in C. elegans. Development. 138(10):2059-68 PubMed 21471153 Click here to select all mutants from this PubMed ID in the graph

Search genes: daf-16 sea-2
  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Forkhead box protein O;hypothetical protein


Locus: CELE_R13H8.1


Wormbase description: daf-16 encodes the sole C. elegans forkhead box O (FOXO) homologue; DAF-16 functions as a transcription factor that acts in the insulin/IGF-1-mediated signaling (IIS) pathway that regulates dauer formation, longevity, fat metabolism, stress response, and innate immunity; DAF-16 regulates these various processes through isoform-specific expression, isoform-specific regulation by different AKT kinases, and differential regulation of target genes; DAF-16 can interact with the CBP-1 transcription cofactor in vitro, and interacts genetically with other genes in the insulin signaling and with daf-12, which encodes a nuclear hormone receptor; DAF-16 is activated in response to DNA damage during development and co-regulated by EGL-27, alleviates DNA-damage-induced developmental arrest by inducing DAF-16-associated element (DAE)-regulated genes; DAF-16 is broadly expressed but displays isoform-specific tissue enrichment; DAF-16 localizes to both the cytoplasm and the nucleus, with the ratio between the two an important regulator of function.


  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Signal Element on Autosome


Locus: CELE_K10G6.3


Wormbase description: sea-2 encodes a zinc finger protein; SEA-2 is an autosomal signal element (ASE) that functions to interpret the X:A chromosomal ratio; in addition, SEA-2 functions autonomously in the intestine to regulate adult lifespan and autonomously in seam cells to regulate larval developmental timing; in regulating lifespan and developmental timing, SEA-2 functions as a post-transcriptional negative regulator of LIN-28, which specifies the L2 larval developmental program; sea-2 also interacts with the daf-2/insulin-IGF-1 signaling pathway to regulate larval developmental timing and adult lifespan; a SEA-2::GFP fusion protein is expressed in a variety of tissues, including seam cells, intestinal cells, pharyngeal muscles and nerve ring neurons, and localizes diffusely to the cytoplasm and the nucleus.


Orthologs of daf-16;sea-2 in SynergyAge
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Orthologs of daf-16 in SynergyAge
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Orthologs of sea-2 in SynergyAge
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About

SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.

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How to cite us

If you would like to cite this database please use:

Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z

Contact
Robi Tacutu, Ph.D.
Head: Systems Biology of Aging Group, Bioinformatics & Structural Biochemistry Department
Institute of Biochemistry, Ground floor
Splaiul Independentei 296, Bucharest, Romania
Email:

Group webpage: www.aging-research.group