Lifespan changes: From wild type to glp-1;hlh-30
20
OP50
17.7
22.92%
glp-1(e2141); hlh-30(tm1978) double mutants to have mean lifespans similar to hlh-30(tm1978) single mutants.
Double mutant glp-1(e2141);hlh-30(tm1978) has a lifespan of 17.7 days, while single mutant glp-1(e2141) has a lifespan of 17.7 days, single mutant hlh-30(tm1978) has a lifespan of 15.7 days and wild type has a lifespan of 14.4 days.
Dependent
Lapierre LR et al., 2013;4:2267., The TFEB orthologue HLH-30 regulates autophagy and modulates longevity in Caenorhabditis elegans. Nat Commun. 4:2267 23925298 Click here to select all mutants from this PubMed ID in the graph
20
OP50
16.7
4.38%
glp-1(e2141); hlh-30(tm1978) double mutants to have mean lifespans similar to hlh-30(tm1978) single mutants.
Double mutant glp-1(e2141);hlh-30(tm1978) has a lifespan of 16.7 days, while single mutant glp-1(e2141) has a lifespan of 19.8 days, single mutant hlh-30(tm1978) has a lifespan of 16.0 days and wild type has a lifespan of 16.0 days.
Dependent
Lapierre LR et al., 2013;4:2267., The TFEB orthologue HLH-30 regulates autophagy and modulates longevity in Caenorhabditis elegans. Nat Commun. 4:2267 23925298 Click here to select all mutants from this PubMed ID in the graph
20
OP50
17.6
-8.33%
glp-1(e2141); hlh-30(tm1978) double mutants to have mean lifespans similar to hlh-30(tm1978) single mutants.
Double mutant glp-1(e2141);hlh-30(tm1978) has a lifespan of 17.6 days, while single mutant glp-1(e2141) has a lifespan of 34.7 days, single mutant hlh-30(tm1978) has a lifespan of 20.5 days and wild type has a lifespan of 19.2 days.
Antagonistic (negative)
Lapierre LR et al., 2013;4:2267., The TFEB orthologue HLH-30 regulates autophagy and modulates longevity in Caenorhabditis elegans. Nat Commun. 4:2267 23925298 Click here to select all mutants from this PubMed ID in the graph
20
OP50
16.6
-5.68%
glp-1(e2141); hlh-30(tm1978) double mutants to have mean lifespans similar to hlh-30(tm1978) single mutants.
Double mutant glp-1(e2141);hlh-30(tm1978) has a lifespan of 16.6 days, while single mutant glp-1(e2141) has a lifespan of 23.8 days, single mutant hlh-30(tm1978) has a lifespan of 18.8 days and wild type has a lifespan of 17.6 days.
Antagonistic (negative)
Lapierre LR et al., 2013;4:2267., The TFEB orthologue HLH-30 regulates autophagy and modulates longevity in Caenorhabditis elegans. Nat Commun. 4:2267 23925298 Click here to select all mutants from this PubMed ID in the graph
Protein glp-1
Locus: CELE_F02A9.6
Wormbase description: glp-1 encodes an N-glycosylated transmembrane protein that, along with LIN-12, comprises one of two C. elegans members of the LIN-12/Notch family of receptors; from the N- to the C-terminus, GLP-1 is characterized by ten extracellular EGF-like repeats, three LIN-12/Notch repeats, a CC-linker, a transmembrane domain, a RAM domain, six intracellular ankyrin repeats, and a PEST sequence; in C. elegans, GLP-1 activity is required for cell fate specification in germline and somatic tissues; in the germline, GLP-1, acting as a receptor for the DSL family ligand LAG-2, is essential for mitotic proliferation of germ cells and maintenance of germline stem cells; in somatic tissues, maternally provided GLP-1, acting as a receptor for the DSL family ligand APX-1, is required for inductive interactions that specify the fates of certain embryonic blastomeres; GLP-1 is also required for some later embryonic cell fate decisions, and in these decisions its activity is functionally redundant with that of LIN-12; GLP-1 expression is regulated temporally and spatially via translational control, as GLP-1 mRNA, present ubiquitously in the germline and embryo, yields detectable protein solely in lateral, interior, and endomembranes of distal, mitotic germ cells, and then predominantly in the AB blastomere and its descendants in the early embryo; proper spatial translation of glp-1 mRNA in the embryo is dependent upon genes such as the par genes, that are required for normal anterior-posterior asymmetry in the early embryo; signaling through GLP-1 controls the activity of the downstream Notch pathway components LAG-3 and LAG-1, the latter being predicted to function as part of a transcriptional feedback mechanism that positively regulates GLP-1 expression; signaling through the DNA-binding protein LAG-1 is believed to involve a direct interaction between LAG-1 and the GLP-1 RAM and ankyrin domains
Helix Loop Helix
Locus: CELE_W02C12.3
Wormbase description: hlh-30 encodes a predicted basic helix-loop-helix (bHLH) transcription factor, one of 42 such genes in the C. elegans genome, it is spliced to give 18 different transcripts; it is orthologous to human microphthalmia-associated transcription factor (HGNC:MITF); loss of hlh-30 activity via RNAi results in reduced fat storage; HLH-30 demonstrates sequence-specific DNA binding for the E box sequence CACGTG and likely binds DNA as a homodimer; expression profiles of hlh-30 mutants indicate that, like its human ortholog, HLH-30 regulates expression of genes involved in metabolism; at least one of the bHLH protein isoforms appears to be important for an infection-specific immune response to M. nematophilum, though the overall induction of this gene following infection was not appreciable (1.3-fold).
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SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.
If you would like to cite this database please use:
Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z
Group webpage: www.aging-research.group