glp-1;lmp-1

Lifespan changes: From wild type to glp-1;lmp-1

There is no network for this step.
Fullscreen mode
Hide graph
Legend

Genetic mutants with glp-1, lmp-1 alterations

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    20

  • Diet

    OP50

  • Lifespan (days)

    15.42

  • Lifespan change (compared to wild type)

    -11.48%

  • Phenotype

    Knockdown of the lysosomal glycoprotein lmp-1 did not shorten glp-1-mediated lifespan extension.

  • Lifespan comparisons

    Double mutant glp-1(e2141);lmp-1(RNAi) has a lifespan of 15.42 days, while single mutant lmp-1(RNAi) has a lifespan of 17.14 days, single mutant glp-1(e2141) has a lifespan of 17.42 days and wild type has a lifespan of 17.42 days.

  • Type of interaction
    See methods

    Synergistic (negative)

  • Citation
    View abstract

    Lapierre LR et al., 2013;4:2267., The TFEB orthologue HLH-30 regulates autophagy and modulates longevity in Caenorhabditis elegans. Nat Commun. 4:2267 PubMed 23925298 Click here to select all mutants from this PubMed ID in the graph

  • Temperature °C

    20

  • Diet

    OP50

  • Lifespan (days)

    17.2

  • Lifespan change (compared to wild type)

    2.99%

  • Phenotype

    Knockdown of the lysosomal glycoprotein lmp-1 did not shorten glp-1-mediated lifespan extension.

  • Lifespan comparisons

    Double mutant glp-1(e2141);lmp-1(RNAi) has a lifespan of 17.2 days, while single mutant lmp-1(RNAi) has a lifespan of 16.8 days, single mutant glp-1(e2141) has a lifespan of 19.4 days and wild type has a lifespan of 16.7 days.

  • Type of interaction
    See methods

    Dependent

  • Citation
    View abstract

    Lapierre LR et al., 2013;4:2267., The TFEB orthologue HLH-30 regulates autophagy and modulates longevity in Caenorhabditis elegans. Nat Commun. 4:2267 PubMed 23925298 Click here to select all mutants from this PubMed ID in the graph

  • Temperature °C

    20

  • Diet

    OP50

  • Lifespan (days)

    16.6

  • Lifespan change (compared to wild type)

    -7.26%

  • Phenotype

    Knockdown of the lysosomal glycoprotein lmp-1 did not shorten glp-1-mediated lifespan extension.

  • Lifespan comparisons

    Double mutant glp-1(e2141);lmp-1(RNAi) has a lifespan of 16.6 days, while single mutant lmp-1(RNAi) has a lifespan of 15.8 days, single mutant glp-1(e2141) has a lifespan of 17.3 days and wild type has a lifespan of 17.9 days.

  • Type of interaction
    See methods

    Dependent

  • Citation
    View abstract

    Lapierre LR et al., 2013;4:2267., The TFEB orthologue HLH-30 regulates autophagy and modulates longevity in Caenorhabditis elegans. Nat Commun. 4:2267 PubMed 23925298 Click here to select all mutants from this PubMed ID in the graph

  • Temperature °C

    20

  • Diet

    OP50

  • Lifespan (days)

    18.3

  • Lifespan change (compared to wild type)

    15.82%

  • Phenotype

    Knockdown of the lysosomal glycoprotein lmp-1 did not shorten glp-1-mediated lifespan extension.

  • Lifespan comparisons

    Double mutant glp-1(e2141);lmp-1(RNAi) has a lifespan of 18.3 days, while single mutant lmp-1(RNAi) has a lifespan of 17.8 days, single mutant glp-1(e2141) has a lifespan of 20.5 days and wild type has a lifespan of 15.8 days.

  • Type of interaction
    See methods

    Dependent

  • Citation
    View abstract

    Lapierre LR et al., 2013;4:2267., The TFEB orthologue HLH-30 regulates autophagy and modulates longevity in Caenorhabditis elegans. Nat Commun. 4:2267 PubMed 23925298 Click here to select all mutants from this PubMed ID in the graph

Search genes: glp-1 lmp-1
  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Protein glp-1


Locus: CELE_F02A9.6


Wormbase description: glp-1 encodes an N-glycosylated transmembrane protein that, along with LIN-12, comprises one of two C. elegans members of the LIN-12/Notch family of receptors; from the N- to the C-terminus, GLP-1 is characterized by ten extracellular EGF-like repeats, three LIN-12/Notch repeats, a CC-linker, a transmembrane domain, a RAM domain, six intracellular ankyrin repeats, and a PEST sequence; in C. elegans, GLP-1 activity is required for cell fate specification in germline and somatic tissues; in the germline, GLP-1, acting as a receptor for the DSL family ligand LAG-2, is essential for mitotic proliferation of germ cells and maintenance of germline stem cells; in somatic tissues, maternally provided GLP-1, acting as a receptor for the DSL family ligand APX-1, is required for inductive interactions that specify the fates of certain embryonic blastomeres; GLP-1 is also required for some later embryonic cell fate decisions, and in these decisions its activity is functionally redundant with that of LIN-12; GLP-1 expression is regulated temporally and spatially via translational control, as GLP-1 mRNA, present ubiquitously in the germline and embryo, yields detectable protein solely in lateral, interior, and endomembranes of distal, mitotic germ cells, and then predominantly in the AB blastomere and its descendants in the early embryo; proper spatial translation of glp-1 mRNA in the embryo is dependent upon genes such as the par genes, that are required for normal anterior-posterior asymmetry in the early embryo; signaling through GLP-1 controls the activity of the downstream Notch pathway components LAG-3 and LAG-1, the latter being predicted to function as part of a transcriptional feedback mechanism that positively regulates GLP-1 expression; signaling through the DNA-binding protein LAG-1 is believed to involve a direct interaction between LAG-1 and the GLP-1 RAM and ankyrin domains


  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

LAMP family protein lmp-1


Locus: CELE_C03B1.12


Wormbase description: lmp-1 encodes a protein with similarity to vertebrate lysosome-associated membrane proteins CD68, and appears to be the only protein in C. elegans that has a GYXX (phi) vertebrate lysosomal targeting sequence at its carboxy terminus; LMP-1 is widely expressed in the early embryo, with later expression seen in the intestine, coelomocytes, and neurons; LMP-1 localizes to lysosomes and is recruited to phagosomes upon lysosomal fusion.


Orthologs of glp-1;lmp-1 in SynergyAge
Show in SynergyAge
Species Gene
Orthologs of glp-1 in SynergyAge
Show in SynergyAge
Species Gene
Orthologs of lmp-1 in SynergyAge
Show in SynergyAge
Species Gene
About

SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.

Read more about SynergyAge database

How to cite us

If you would like to cite this database please use:

Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z

Contact
Robi Tacutu, Ph.D.
Head: Systems Biology of Aging Group, Bioinformatics & Structural Biochemistry Department
Institute of Biochemistry, Ground floor
Splaiul Independentei 296, Bucharest, Romania
Email:

Group webpage: www.aging-research.group