clk-1;egl-9

Lifespan changes: From wild type to clk-1;egl-9

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Genetic mutants with clk-1, egl-9 alterations

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    20

  • Lifespan (days)

    19.0

  • Lifespan change (compared to wild type)

    31.94%

  • Phenotype

    The egl-9(sa307) mutation did not further increase the lifespans of clk-1(qm30) mutants.

  • Lifespan comparisons

    Double mutant clk-1(qm30);egl-9(sa307) has a lifespan of 19.0 days, while single mutant egl-9(sa307) has a lifespan of 20.5 days, single mutant clk-1(qm30) has a lifespan of 17.9 days and wild type has a lifespan of 14.4 days.

  • Type of interaction
    See methods

    Dependent

  • Citation
    View abstract

    Lee SJ et al., 2010, Inhibition of respiration extends C. elegans life span via reactive oxygen species that increase HIF-1 activity. Curr Biol. 20(23):2131-6 PubMed 21093262 Click here to select all mutants from this PubMed ID in the graph

Search genes: clk-1 egl-9
  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

5-demethoxyubiquinone hydroxylase, mitochondrial


Locus: CELE_ZC395.2


Wormbase description: clk-1 encodes the C. elegans ortholog of COQ7/CAT5, a highly conserved demethoxyubiquinone (DMQ) hydroxylase that is necessary for the biosynthesis of ubiquinone (coenzyme Q, Q9) from 5-demethoxyubiquinone (DMQ9); in C. elegans, CLK-1 activity is required for normal physiological rates of growth, development, behavior, and aging, as well as for normal brood sizes.


  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Hypoxia-inducible factor prolyl hydroxylase


Locus: CELE_F22E12.4


Wormbase description: egl-9 encodes a proline hydroxylase; EGL-9 functions in a conserved hypoxia-sensing pathway to negatively regulate HIF-1 (hypoxia inducible factor) by hydroxylating prolyl HIF-1 residues; EGL-9 activity is negatively regulated by its physical association with CYSL-1, a protein with similarity to cysteine synthases that acts to transduce information about the environmental O2 levels through H2S (hydrogen sulfide) signaling.


Orthologs of clk-1;egl-9 in SynergyAge
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Species Gene
Orthologs of clk-1 in SynergyAge
Show in SynergyAge
Species Gene
Orthologs of egl-9 in SynergyAge
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Species Gene
About

SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.

Read more about SynergyAge database

How to cite us

If you would like to cite this database please use:

Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z

Contact
Robi Tacutu, Ph.D.
Head: Systems Biology of Aging Group, Bioinformatics & Structural Biochemistry Department
Institute of Biochemistry, Ground floor
Splaiul Independentei 296, Bucharest, Romania
Email:

Group webpage: www.aging-research.group