hif-1;osm-5

Lifespan changes: From wild type to hif-1;osm-5

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Genetic mutants with hif-1, osm-5 alterations

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    20

  • Lifespan (days)

    20.4

  • Lifespan change (compared to wild type)

    33.33%

  • Phenotype

    Chemosensory-defective osm-5(p813) mutants live long and their longevity was not shortened by hif-1 RNAi treatment.

  • Lifespan comparisons

    Double mutant hif-1(RNAi);osm-5(p813) has a lifespan of 20.4 days, while single mutant hif-1(RNAi) has a lifespan of 15.7 days, single mutant osm-5(p813) has a lifespan of 21.5 days and wild type has a lifespan of 15.3 days.

  • Type of interaction
    See methods

    Dependent

  • Citation
    View abstract

    Lee SJ et al., 2010, Inhibition of respiration extends C. elegans life span via reactive oxygen species that increase HIF-1 activity. Curr Biol. 20(23):2131-6 PubMed 21093262 Click here to select all mutants from this PubMed ID in the graph

Search genes: hif-1 osm-5
  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

HIF (Hypoxia Inducible Factor) homologa;Hypoxia-inducible factor 1


Locus: CELE_F38A6.3


Wormbase description: hif-1 encodes an ortholog of the mammalian hypoxia-induced factor HIF-1, and is required for survival in hypoxic environments (1% oxygen) that have no effect on wild-type C. elegans.


  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

hypothetical protein


Locus: CELE_Y41G9A.1


Wormbase description: osm-5 encodes the ortholog of the murine polycystic kidney disease gene Tg737 (which encodes the protein Polaris) and human IFT88; osm-5 is required for the proper morphology of the cilia of chemosensory neurons and is involved in intraflagellar transport; the abnormalities in cilia structure in osm-5 mutants lead to defects in several processes like osmotic avoidance, chemotaxis, dauer formation, male mating and life span; osm-5 is expressed in ciliated sensory neurons and localizes to the transition zones of the amphids, phasmids, labials and rays of the male tail; osm-5 expression is regulated by the RFX-type transcription factor, DAF-19, that also regulates the expression of other genes involved in cilia formation.


Orthologs of hif-1;osm-5 in SynergyAge
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Species Gene
Orthologs of hif-1 in SynergyAge
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Species Gene
Orthologs of osm-5 in SynergyAge
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Species Gene
About

SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.

Read more about SynergyAge database

How to cite us

If you would like to cite this database please use:

Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z

Contact
Robi Tacutu, Ph.D.
Head: Systems Biology of Aging Group, Bioinformatics & Structural Biochemistry Department
Institute of Biochemistry, Ground floor
Splaiul Independentei 296, Bucharest, Romania
Email:

Group webpage: www.aging-research.group