daf-16;vhl-1

Lifespan changes: From wild type to daf-16;vhl-1

There is no network for this step.
Fullscreen mode
Hide graph
Legend

Genetic mutants with daf-16, vhl-1 alterations

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    20

  • Diet

    OP50;NGM

  • Lifespan (days)

    22.8

  • Lifespan change (compared to wild type)

    5.56%

  • Phenotype

    Daf-16(RNAi) does not prevent lifespan extension from deletion of vhl-1.

  • Lifespan comparisons

    Double mutant daf-16(RNAi);vhl-1(ok161) has a lifespan of 22.8 days, while single mutant daf-16(RNAi) has a lifespan of 17.6 days, single mutant vhl-1(ok161) has a lifespan of 29.2 days and wild type has a lifespan of 21.6 days.

  • Type of interaction
    See methods

    Opposite lifespan effects of single mutants

  • Citation
    View abstract

    Mehta R et al., 2009, Proteasomal regulation of the hypoxic response modulates aging in C. elegans. Science. 324(5931):1196-8 PubMed 19372390 Click here to select all mutants from this PubMed ID in the graph

  • Temperature °C

    20

  • Diet

    NGM; OP50; HT115

  • Lifespan (days)

    17.0

  • Lifespan change (compared to wild type)

    -5.56%

  • Phenotype

    Knockdown of daf-16 resulted in an de creased lifespan in the wild-type N2 worms. Downregulation of daf-16 did not abrogate the life-extending effect of vhl-1 deletion, indicating that pVHL acts in a pathway distinct from insulin-FOXO signaling.

  • Lifespan comparisons

    Double mutant daf-16(RNAi);vhl-1(ok161) has a lifespan of 17.0 days, while single mutant daf-16(RNAi) has a lifespan of 12.0 days, single mutant vhl-1(ok161) has a lifespan of 21.8 days and wild type has a lifespan of 18.0 days.

  • Type of interaction
    See methods

    Opposite lifespan effects of single mutants

  • Citation
    View abstract

    Müller RU et al., 2009, The von Hippel Lindau tumor suppressor limits longevity. J Am Soc Nephrol. 20(12):2513-7 PubMed 19797165 Click here to select all mutants from this PubMed ID in the graph

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    20

  • Diet

    OP50;NGM

  • Lifespan (days)

    18.23

  • Lifespan comparisons

    Double mutant daf-16(mu86);vhl-1(RNAi) has a lifespan of 18.23 days, while single mutant daf-16(mu86) has a lifespan of 13.92 days.

  • Citation
    View abstract

    Mehta R et al., 2009, Proteasomal regulation of the hypoxic response modulates aging in C. elegans. Science. 324(5931):1196-8 PubMed 19372390 Click here to select all mutants from this PubMed ID in the graph

Search genes: daf-16 vhl-1
  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Forkhead box protein O;hypothetical protein


Locus: CELE_R13H8.1


Wormbase description: daf-16 encodes the sole C. elegans forkhead box O (FOXO) homologue; DAF-16 functions as a transcription factor that acts in the insulin/IGF-1-mediated signaling (IIS) pathway that regulates dauer formation, longevity, fat metabolism, stress response, and innate immunity; DAF-16 regulates these various processes through isoform-specific expression, isoform-specific regulation by different AKT kinases, and differential regulation of target genes; DAF-16 can interact with the CBP-1 transcription cofactor in vitro, and interacts genetically with other genes in the insulin signaling and with daf-12, which encodes a nuclear hormone receptor; DAF-16 is activated in response to DNA damage during development and co-regulated by EGL-27, alleviates DNA-damage-induced developmental arrest by inducing DAF-16-associated element (DAE)-regulated genes; DAF-16 is broadly expressed but displays isoform-specific tissue enrichment; DAF-16 localizes to both the cytoplasm and the nucleus, with the ratio between the two an important regulator of function.


  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

von Hippel-Lindau tumor suppressor homolog


Locus: CELE_F08G12.4


Wormbase description: vhl-1 is orthologous to the mammalian von Hippel-Landau tumor suppressor VHL, which is a cullin E3 ubiquitin ligase; vhl-1 promotes the ubiquitination and degradation of the hif-1 hypoxic response transcription factor; vhl-1 and hif-1 act to modulate life span and proteotoxicity, vhl-1 mutants live longer compared to wild-type, by a mechanism separate from dietary restriction and insulin signaling; vhl-1 may also have a hif-1 independent function related to the extracellular matrix.


Orthologs of daf-16;vhl-1 in SynergyAge
Show in SynergyAge
Species Gene
Orthologs of daf-16 in SynergyAge
Show in SynergyAge
Species Gene
Orthologs of vhl-1 in SynergyAge
Show in SynergyAge
Species Gene
About

SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.

Read more about SynergyAge database

How to cite us

If you would like to cite this database please use:

Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z

Contact
Robi Tacutu, Ph.D.
Head: Systems Biology of Aging Group, Bioinformatics & Structural Biochemistry Department
Institute of Biochemistry, Ground floor
Splaiul Independentei 296, Bucharest, Romania
Email:

Group webpage: www.aging-research.group