dod-18;rrf-3

Lifespan changes: From wild type to dod-18;rrf-3

There is no network for this step.
Fullscreen mode
Hide graph
Legend

Genetic mutants with dod-18, rrf-3 alterations

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    20

  • Diet

    OP50

  • Lifespan (days)

    19.9

  • Lifespan comparisons

    Double mutant dod-18(RNAi);rrf-3(pk1426) has a lifespan of 19.9 days, while single mutant rrf-3(pk1426) has a lifespan of 15.0 days.

  • Citation
    View abstract

    Murphy CT et al., 2003, Genes that act downstream of DAF-16 to influence the lifespan of Caenorhabditis elegans. Nature. 424(6946):277-83 PubMed 12845331 Click here to select all mutants from this PubMed ID in the graph

  • Temperature °C

    20-25

  • Diet

    OP50

  • Lifespan (days)

    19.0

  • Lifespan comparisons

    Double mutant dod-18(RNAi);rrf-3(pk1426) has a lifespan of 19.0 days, while single mutant rrf-3(pk1426) has a lifespan of 15.0 days.

  • Citation
    View abstract

    Murphy CT et al., 2003, Genes that act downstream of DAF-16 to influence the lifespan of Caenorhabditis elegans. Nature. 424(6946):277-83 PubMed 12845331 Click here to select all mutants from this PubMed ID in the graph

Search genes: dod-18 rrf-3
  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Downstream Of DAF-16 (regulated by DAF-16)


Locus: CELE_C54G4.6


Wormbase description: dod-18 encodes a Maf-like protein required for normally short lifespan; dod-18 is repressed in daf-2 mutants and induced in daf-16 mutants, and dod-18(RNAi) lengthens lifespan by 30%; MAF-like proteins are ubiquitous among eukarya, bacteria, and archaea; DOD-18 is orthologous to the N-terminal ~200 residues of human ASMTL (OMIM:300162), and to Bacillus subtilis Maf (Multicopy Associated Filamentation) protein, which inhibits septum formation; while the specific biochemical function of Maf-like proteins is unknown, the tertiary structure of B. subtilis Maf is consistent with its binding nucleic acid.


  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

RNA-dependent RNA polymerase Family


Locus: CELE_F10B5.7


Wormbase description: rrf-3 encodes an RNA-directed RNA polymerase (RdRP) homolog that inhibits somatic RNAi, and thus promotes activity of repeated genes (e.g., multicopy transgenic arrays); the effect of RRF-3 on RNAi is opposite to that of RRF-1 (which stimulates somatic RNAi), which might arise from competition by RRF-3 with RRF-1 or EGO-1 in RNAi formation; rrf-3(allele) or rrf-3(allele2) mutants are hypersensitive to somatic RNAi, and conversely suppress the activity of an integrated rol6 (su1006) transgene.


Orthologs of dod-18;rrf-3 in SynergyAge
Show in SynergyAge
Species Gene
Orthologs of dod-18 in SynergyAge
Show in SynergyAge
Species Gene
Orthologs of rrf-3 in SynergyAge
Show in SynergyAge
Species Gene
About

SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.

Read more about SynergyAge database

How to cite us

If you would like to cite this database please use:

Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z

Contact
Robi Tacutu, Ph.D.
Head: Systems Biology of Aging Group, Bioinformatics & Structural Biochemistry Department
Institute of Biochemistry, Ground floor
Splaiul Independentei 296, Bucharest, Romania
Email:

Group webpage: www.aging-research.group