glp-1;nhr-49

Lifespan changes: From wild type to glp-1;nhr-49

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Genetic mutants with glp-1, nhr-49 alterations

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    20

  • Lifespan (days)

    35.3

  • Lifespan change (compared to wild type)

    63.43%

  • Lifespan comparisons

    Double mutant glp-1(e2141ts);nhr-49(OE) has a lifespan of 35.3 days, while single mutant glp-1(e2141ts) has a lifespan of 31.0 days and wild type has a lifespan of 21.6 days.

  • Type of interaction
    See methods

    Partially known monotony. Positive epistasis

  • Citation
    View abstract

    Ratnappan R et al., 2014, Germline signals deploy NHR-49 to modulate fatty-acid β-oxidation and desaturation in somatic tissues of C. elegans. PLoS Genet. 10(12):e1004829 PubMed 25474470 Click here to select all mutants from this PubMed ID in the graph

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    20

  • Lifespan (days)

    14.1

  • Lifespan change (compared to wild type)

    -34.72%

  • Lifespan comparisons

    Double mutant glp-1(e2141ts);nhr-49(nr2041) has a lifespan of 14.1 days, while single mutant glp-1(e2141ts) has a lifespan of 31.0 days and wild type has a lifespan of 21.6 days.

  • Type of interaction
    See methods

    Opposite lifespan effects of single mutants

  • Citation
    View abstract

    Ratnappan R et al., 2014, Germline signals deploy NHR-49 to modulate fatty-acid β-oxidation and desaturation in somatic tissues of C. elegans. PLoS Genet. 10(12):e1004829 PubMed 25474470 Click here to select all mutants from this PubMed ID in the graph

Search genes: glp-1 nhr-49
  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Protein glp-1


Locus: CELE_F02A9.6


Wormbase description: glp-1 encodes an N-glycosylated transmembrane protein that, along with LIN-12, comprises one of two C. elegans members of the LIN-12/Notch family of receptors; from the N- to the C-terminus, GLP-1 is characterized by ten extracellular EGF-like repeats, three LIN-12/Notch repeats, a CC-linker, a transmembrane domain, a RAM domain, six intracellular ankyrin repeats, and a PEST sequence; in C. elegans, GLP-1 activity is required for cell fate specification in germline and somatic tissues; in the germline, GLP-1, acting as a receptor for the DSL family ligand LAG-2, is essential for mitotic proliferation of germ cells and maintenance of germline stem cells; in somatic tissues, maternally provided GLP-1, acting as a receptor for the DSL family ligand APX-1, is required for inductive interactions that specify the fates of certain embryonic blastomeres; GLP-1 is also required for some later embryonic cell fate decisions, and in these decisions its activity is functionally redundant with that of LIN-12; GLP-1 expression is regulated temporally and spatially via translational control, as GLP-1 mRNA, present ubiquitously in the germline and embryo, yields detectable protein solely in lateral, interior, and endomembranes of distal, mitotic germ cells, and then predominantly in the AB blastomere and its descendants in the early embryo; proper spatial translation of glp-1 mRNA in the embryo is dependent upon genes such as the par genes, that are required for normal anterior-posterior asymmetry in the early embryo; signaling through GLP-1 controls the activity of the downstream Notch pathway components LAG-3 and LAG-1, the latter being predicted to function as part of a transcriptional feedback mechanism that positively regulates GLP-1 expression; signaling through the DNA-binding protein LAG-1 is believed to involve a direct interaction between LAG-1 and the GLP-1 RAM and ankyrin domains


  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Nuclear Hormone Receptor family;Nuclear hormone receptor family member nhr-49


Locus: CELE_K10C3.6


Wormbase description: nhr-49 encodes a nuclear hormone receptor (NHR) related to the mammalian HNF4 (hepatocyte nuclear factor 4) family of NHRs; nhr-49 functions as a key regulator of fat metabolism and lifespan by regulating induction of beta-oxidation genes upon food deprivation and activation of stearoyl-CoA desaturase in fed animals, respectively; NHR-49 activates transcription in conjunction with the MDT-15 mediator subunit with which it physically interacts.


Orthologs of glp-1;nhr-49 in SynergyAge
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Orthologs of glp-1 in SynergyAge
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Orthologs of nhr-49 in SynergyAge
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About

SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.

Read more about SynergyAge database

How to cite us

If you would like to cite this database please use:

Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z

Contact
Robi Tacutu, Ph.D.
Head: Systems Biology of Aging Group, Bioinformatics & Structural Biochemistry Department
Institute of Biochemistry, Ground floor
Splaiul Independentei 296, Bucharest, Romania
Email:

Group webpage: www.aging-research.group