daf-16;nhr-49

Lifespan changes: From wild type to daf-16;nhr-49

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Genetic mutants with daf-16, nhr-49 alterations

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    20

  • Diet

    OP50

  • Lifespan (days)

    11.8

  • Lifespan change (compared to wild type)

    -41.87%

  • Lifespan comparisons

    Double mutant daf-16(RNAi);nhr-49(OE) has a lifespan of 11.8 days, while single mutant nhr-49(OE) has a lifespan of 21.6 days and wild type has a lifespan of 20.3 days.

  • Type of interaction
    See methods

    Contains dependence

  • Citation
    View abstract

    Ratnappan R et al., 2014, Germline signals deploy NHR-49 to modulate fatty-acid β-oxidation and desaturation in somatic tissues of C. elegans. PLoS Genet. 10(12):e1004829 PubMed 25474470 Click here to select all mutants from this PubMed ID in the graph

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    20

  • Lifespan (days)

    17.4

  • Lifespan change (compared to wild type)

    -5.95%

  • Phenotype

    nhr-49 overexpression in daf-16 mutants caused a small additional increment in their longevity.

  • Lifespan comparisons

    Double mutant daf-16(mu86);nhr-49(OE) has a lifespan of 17.4 days, while single mutant daf-16(mu86) has a lifespan of 15.6 days, single mutant nhr-49(OE) has a lifespan of 24.9 days and wild type has a lifespan of 18.5 days.

  • Type of interaction
    See methods

    Opposite lifespan effects of single mutants

  • Citation
    View abstract

    Ratnappan R et al., 2014, Germline signals deploy NHR-49 to modulate fatty-acid β-oxidation and desaturation in somatic tissues of C. elegans. PLoS Genet. 10(12):e1004829 PubMed 25474470 Click here to select all mutants from this PubMed ID in the graph

Search genes: daf-16 nhr-49
  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Forkhead box protein O;hypothetical protein


Locus: CELE_R13H8.1


Wormbase description: daf-16 encodes the sole C. elegans forkhead box O (FOXO) homologue; DAF-16 functions as a transcription factor that acts in the insulin/IGF-1-mediated signaling (IIS) pathway that regulates dauer formation, longevity, fat metabolism, stress response, and innate immunity; DAF-16 regulates these various processes through isoform-specific expression, isoform-specific regulation by different AKT kinases, and differential regulation of target genes; DAF-16 can interact with the CBP-1 transcription cofactor in vitro, and interacts genetically with other genes in the insulin signaling and with daf-12, which encodes a nuclear hormone receptor; DAF-16 is activated in response to DNA damage during development and co-regulated by EGL-27, alleviates DNA-damage-induced developmental arrest by inducing DAF-16-associated element (DAE)-regulated genes; DAF-16 is broadly expressed but displays isoform-specific tissue enrichment; DAF-16 localizes to both the cytoplasm and the nucleus, with the ratio between the two an important regulator of function.


  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Nuclear Hormone Receptor family;Nuclear hormone receptor family member nhr-49


Locus: CELE_K10C3.6


Wormbase description: nhr-49 encodes a nuclear hormone receptor (NHR) related to the mammalian HNF4 (hepatocyte nuclear factor 4) family of NHRs; nhr-49 functions as a key regulator of fat metabolism and lifespan by regulating induction of beta-oxidation genes upon food deprivation and activation of stearoyl-CoA desaturase in fed animals, respectively; NHR-49 activates transcription in conjunction with the MDT-15 mediator subunit with which it physically interacts.


Orthologs of daf-16;nhr-49 in SynergyAge
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Orthologs of daf-16 in SynergyAge
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Orthologs of nhr-49 in SynergyAge
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About

SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.

Read more about SynergyAge database

How to cite us

If you would like to cite this database please use:

Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z

Contact
Robi Tacutu, Ph.D.
Head: Systems Biology of Aging Group, Bioinformatics & Structural Biochemistry Department
Institute of Biochemistry, Ground floor
Splaiul Independentei 296, Bucharest, Romania
Email:

Group webpage: www.aging-research.group