daf-15;skn-1

Lifespan changes: From wild type to daf-15;skn-1

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Genetic mutants with daf-15, skn-1 alterations

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    20

  • Diet

    NGM

  • Lifespan (days)

    19.45

  • Lifespan change (compared to wild type)

    -17.83%

  • Phenotype

    Knockdown of TORC1 pathway gene (daf-15) failed to increase lifespan in a skn-1 mutant.

  • Lifespan comparisons

    Double mutant daf-15(RNAi);skn-1(zu67) has a lifespan of 19.45 days, while single mutant daf-15(RNAi) has a lifespan of 26.43 days, single mutant skn-1(zu67) has a lifespan of 18.96 days and wild type has a lifespan of 23.67 days.

  • Type of interaction
    See methods

    Opposite lifespan effects of single mutants

  • Citation
    View abstract

    Robida-Stubbs S et al., 2012, TOR signaling and rapamycin influence longevity by regulating SKN-1/Nrf and DAF-16/FoxO. Cell Metab. 15(5):713-24 PubMed 22560223 Click here to select all mutants from this PubMed ID in the graph

  • Temperature °C

    20

  • Diet

    NGM

  • Lifespan (days)

    18.37

  • Lifespan change (compared to wild type)

    -20.41%

  • Phenotype

    Knockdown of TORC1 pathway gene (daf-15) failed to increase lifespan in a skn-1 mutant.

  • Lifespan comparisons

    Double mutant daf-15(RNAi);skn-1(zu67) has a lifespan of 18.37 days, while single mutant daf-15(RNAi) has a lifespan of 28.0 days, single mutant skn-1(zu67) has a lifespan of 17.71 days and wild type has a lifespan of 23.08 days.

  • Type of interaction
    See methods

    Opposite lifespan effects of single mutants

  • Citation
    View abstract

    Robida-Stubbs S et al., 2012, TOR signaling and rapamycin influence longevity by regulating SKN-1/Nrf and DAF-16/FoxO. Cell Metab. 15(5):713-24 PubMed 22560223 Click here to select all mutants from this PubMed ID in the graph

  • Temperature °C

    20

  • Diet

    NGM

  • Lifespan (days)

    19.95

  • Lifespan change (compared to wild type)

    -19.46%

  • Phenotype

    Knockdown of TORC1 pathway gene (daf-15) failed to increase lifespan in a skn-1 mutant.

  • Lifespan comparisons

    Double mutant daf-15(RNAi);skn-1(zu67) has a lifespan of 19.95 days, while single mutant daf-15(RNAi) has a lifespan of 26.97 days, single mutant skn-1(zu67) has a lifespan of 20.11 days and wild type has a lifespan of 24.77 days.

  • Type of interaction
    See methods

    Opposite lifespan effects of single mutants

  • Citation
    View abstract

    Robida-Stubbs S et al., 2012, TOR signaling and rapamycin influence longevity by regulating SKN-1/Nrf and DAF-16/FoxO. Cell Metab. 15(5):713-24 PubMed 22560223 Click here to select all mutants from this PubMed ID in the graph

Search genes: daf-15 skn-1
  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

hypothetical protein


Locus: CELE_C10C5.6


Wormbase description: daf-15 encodes an ortholog of RAPTOR (the regulatory associated protein of mTOR), and is regulated by DAF-16; daf-15 is required for non-dauer development, at least in some tissues or stages; daf-15(m81) mutants constitutively and irreversibly form abnormal dauer-like larvae (and are thus effectively lethal/sterile); mutants do not form true dauers when exposed to dauer pheromone, yet execute only two molts.


  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Protein skinhead-1;SKiNhead


Locus: CELE_T19E7.2


Wormbase description: skn-1 encodes a bZip transcription factor orthologous to the mammalian Nrf (Nuclear factor-erythroid-related factor) transcription factors; during early embryogenesis, maternally provided SKN-1 is required for specification of the EMS blastomere, a mesendodermal precursor that gives rise to pharyngeal, muscle, and intestinal cells; later, during postembryonic development, SKN-1 functions in the p38 MAPK pathway to regulate the oxidative stress response and in parallel to DAF-16/FOXO in the DAF-2-mediated insulin/IGF-1-like signaling pathway to regulate adult lifespan; in vitro assays indicate that SKN-1 can be directly phosphorylated by the AKT-1, AKT-2, and SGK-1 kinases that lie downstream of DAF-2 in the insulin signaling pathway and in vivo experiments suggest that this phosphorylation is essential for regulation of SKN-1 nuclear accumulation and hence, transcriptional regulator activity; in the early embryo, SKN-1 is detected at highest levels in nuclei of the P1 blastomere and its descendants through the 8-cell stage of embryogenesis; later in embryogenesis, SKN-1 is observed in all hypodermal and intestinal nuclei, with reporter constructs indicating that intestinal expression begins as early as the 50-100-cell stage; in larvae and young adults, SKN-1::GFP reporters are expressed in the intestine and ASI neurons, with expression in intestinal nuclei enhanced under conditions of stress or reduced DAF-2 signaling.


Orthologs of daf-15;skn-1 in SynergyAge
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Orthologs of daf-15 in SynergyAge
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Orthologs of skn-1 in SynergyAge
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About

SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.

Read more about SynergyAge database

How to cite us

If you would like to cite this database please use:

Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z

Contact
Robi Tacutu, Ph.D.
Head: Systems Biology of Aging Group, Bioinformatics & Structural Biochemistry Department
Institute of Biochemistry, Ground floor
Splaiul Independentei 296, Bucharest, Romania
Email:

Group webpage: www.aging-research.group