cyc-1;pha-4

Lifespan changes: From wild type to cyc-1;pha-4

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Genetic mutants with cyc-1, pha-4 alterations

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    15

  • Lifespan (days)

    29.2

  • Lifespan change (compared to wild type)

    35.19%

  • Phenotype

    Neither RNAi of pha-4 nor the pha-4(zu225);smg- 1(cc546ts) allele shortened the long lifespan of cyc-1-RNAi-treated animals or isp- 1(qm130) mutant animals any more than reduction of pha-4 in a wild-type background and to a lesser extent than the loss of daf-16 in cyc-1-RNAi-treated animals

  • Lifespan comparisons

    Double mutant cyc-1(RNAi);pha-4(RNAi) has a lifespan of 29.2 days, while single mutant cyc-1(RNAi) has a lifespan of 29.1 days and wild type has a lifespan of 21.6 days.

  • Type of interaction
    See methods

    Partially known monotony. Positive epistasis

  • Citation
    View abstract

    Panowski SH et al., 2007, PHA-4/Foxa mediates diet-restriction-induced longevity of C. elegans. Nature. 447(7144):550-5 PubMed 17476212 Click here to select all mutants from this PubMed ID in the graph

Search genes: cyc-1 pha-4
  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

CYtochrome C


Locus: CELE_C54G4.8


Wormbase description: cyc-1 encodes a component of complex III ( cytochrome c reductase) required for normal ATP production; reduction of ATP production by cyc-1(RNAi) decreases growth rate and body size, slows behavior, and increases lifespan; cyc-1 encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial


  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Defective pharyngeal development protein 4


Locus: CELE_F38A6.1


Wormbase description: pha-4 encodes a FoxA transcription factor; during embryonic development, PHA-4 functions as an organ identity gene whose activity is necessary and sufficient for development of the pharynx/foregut; in addition, PHA-4 plays a key role in regulation of diet-restriction-induced longevity in adult animals; PHA-4 expression begins early in embryogenesis and is seen in pharyngeal and intestinal cells (foregut and midgut); PHA-4 is also expressed later in the developing somatic gonad.


Orthologs of cyc-1;pha-4 in SynergyAge
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Species Gene
Orthologs of cyc-1 in SynergyAge
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Species Gene
Orthologs of pha-4 in SynergyAge
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Species Gene
About

SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.

Read more about SynergyAge database

How to cite us

If you would like to cite this database please use:

Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z

Contact
Robi Tacutu, Ph.D.
Head: Systems Biology of Aging Group, Bioinformatics & Structural Biochemistry Department
Institute of Biochemistry, Ground floor
Splaiul Independentei 296, Bucharest, Romania
Email:

Group webpage: www.aging-research.group