daf-16;ragc-1

Lifespan changes: From wild type to daf-16;ragc-1

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Genetic mutants with daf-16, ragc-1 alterations

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    20

  • Diet

    NGM

  • Lifespan (days)

    20.79

  • Lifespan change (compared to wild type)

    -11.12%

  • Phenotype

    RNAi against ragc-1 gene did not increase lifespan in daf-16 mutants, in contrast to the daf-16 independent longevity associated with TOR kinase inhibition.

  • Lifespan comparisons

    Double mutant daf-16(mgDf47);ragc-1(RNAi) has a lifespan of 20.79 days, while single mutant ragc-1(RNAi) has a lifespan of 29.01 days, single mutant daf-16(mgDf47) has a lifespan of 20.67 days and wild type has a lifespan of 23.39 days.

  • Type of interaction
    See methods

    Opposite lifespan effects of single mutants

  • Citation
    View abstract

    Robida-Stubbs S et al., 2012, TOR signaling and rapamycin influence longevity by regulating SKN-1/Nrf and DAF-16/FoxO. Cell Metab. 15(5):713-24 PubMed 22560223 Click here to select all mutants from this PubMed ID in the graph

  • Temperature °C

    20

  • Diet

    NGM

  • Lifespan (days)

    19.48

  • Lifespan change (compared to wild type)

    -16.89%

  • Phenotype

    RNAi against ragc-1 gene did not increase lifespan in daf-16 mutants, in contrast to the daf-16 independent longevity associated with TOR kinase inhibition.

  • Lifespan comparisons

    Double mutant daf-16(mgDf47);ragc-1(RNAi) has a lifespan of 19.48 days, while single mutant ragc-1(RNAi) has a lifespan of 29.94 days, single mutant daf-16(mgDf47) has a lifespan of 20.0 days and wild type has a lifespan of 23.44 days.

  • Type of interaction
    See methods

    Opposite lifespan effects of single mutants

  • Citation
    View abstract

    Robida-Stubbs S et al., 2012, TOR signaling and rapamycin influence longevity by regulating SKN-1/Nrf and DAF-16/FoxO. Cell Metab. 15(5):713-24 PubMed 22560223 Click here to select all mutants from this PubMed ID in the graph

  • Temperature °C

    20

  • Diet

    NGM

  • Lifespan (days)

    21.65

  • Lifespan change (compared to wild type)

    -8.18%

  • Phenotype

    RNAi against ragc-1 gene did not increase lifespan in daf-16 mutants, in contrast to the daf-16 independent longevity associated with TOR kinase inhibition.

  • Lifespan comparisons

    Double mutant daf-16(mgDf47);ragc-1(RNAi) has a lifespan of 21.65 days, while single mutant ragc-1(RNAi) has a lifespan of 26.7 days, single mutant daf-16(mgDf47) has a lifespan of 20.49 days and wild type has a lifespan of 23.58 days.

  • Type of interaction
    See methods

    Opposite lifespan effects of single mutants

  • Citation
    View abstract

    Robida-Stubbs S et al., 2012, TOR signaling and rapamycin influence longevity by regulating SKN-1/Nrf and DAF-16/FoxO. Cell Metab. 15(5):713-24 PubMed 22560223 Click here to select all mutants from this PubMed ID in the graph

  • Temperature °C

    20

  • Diet

    NGM

  • Lifespan (days)

    21.86

  • Lifespan change (compared to wild type)

    -5.61%

  • Phenotype

    RNAi against ragc-1 gene did not increase lifespan in daf-16 mutants, in contrast to the daf-16 independent longevity associated with TOR kinase inhibition.

  • Lifespan comparisons

    Double mutant daf-16(mgDf47);ragc-1(RNAi) has a lifespan of 21.86 days, while single mutant ragc-1(RNAi) has a lifespan of 30.18 days, single mutant daf-16(mgDf47) has a lifespan of 21.7 days and wild type has a lifespan of 23.16 days.

  • Type of interaction
    See methods

    Opposite lifespan effects of single mutants

  • Citation
    View abstract

    Robida-Stubbs S et al., 2012, TOR signaling and rapamycin influence longevity by regulating SKN-1/Nrf and DAF-16/FoxO. Cell Metab. 15(5):713-24 PubMed 22560223 Click here to select all mutants from this PubMed ID in the graph

Search genes: daf-16 ragc-1
  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Forkhead box protein O;hypothetical protein


Locus: CELE_R13H8.1


Wormbase description: daf-16 encodes the sole C. elegans forkhead box O (FOXO) homologue; DAF-16 functions as a transcription factor that acts in the insulin/IGF-1-mediated signaling (IIS) pathway that regulates dauer formation, longevity, fat metabolism, stress response, and innate immunity; DAF-16 regulates these various processes through isoform-specific expression, isoform-specific regulation by different AKT kinases, and differential regulation of target genes; DAF-16 can interact with the CBP-1 transcription cofactor in vitro, and interacts genetically with other genes in the insulin signaling and with daf-12, which encodes a nuclear hormone receptor; DAF-16 is activated in response to DNA damage during development and co-regulated by EGL-27, alleviates DNA-damage-induced developmental arrest by inducing DAF-16-associated element (DAE)-regulated genes; DAF-16 is broadly expressed but displays isoform-specific tissue enrichment; DAF-16 localizes to both the cytoplasm and the nucleus, with the ratio between the two an important regulator of function.


  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

RAs-related GTP binding protein C homolog


Locus: CELE_Y24F12A.2


Wormbase description: none available


Orthologs of daf-16;ragc-1 in SynergyAge
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Species Gene
Orthologs of daf-16 in SynergyAge
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Species Gene
Orthologs of ragc-1 in SynergyAge
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Species Gene
About

SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.

Read more about SynergyAge database

How to cite us

If you would like to cite this database please use:

Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z

Contact
Robi Tacutu, Ph.D.
Head: Systems Biology of Aging Group, Bioinformatics & Structural Biochemistry Department
Institute of Biochemistry, Ground floor
Splaiul Independentei 296, Bucharest, Romania
Email:

Group webpage: www.aging-research.group