Lifespan changes: From wild type to cdk-2;skn-1
20
NGM
16.6
-14.87%
cdk-2(RNAi) fails to extend lifespan in the skn-1(zu67) mutant.
Double mutant cdk-2(RNAi);skn-1(zu67) has a lifespan of 16.6 days, while single mutant cdk-2(RNAi) has a lifespan of 24.6 days, single mutant skn-1(zu67) has a lifespan of 16.3 days and wild type has a lifespan of 19.5 days.
Opposite lifespan effects of single mutants
Dottermusch M et al., 2016, Cell cycle controls stress response and longevity in C. elegans. Aging (Albany NY). 8(9):2100-2126 27668945 Click here to select all mutants from this PubMed ID in the graph
20
NGM
16.0
-13.98%
cdk-2(RNAi) fails to extend lifespan in the skn-1(zu67) mutant.
Double mutant cdk-2(RNAi);skn-1(zu67) has a lifespan of 16.0 days, while single mutant cdk-2(RNAi) has a lifespan of 23.5 days, single mutant skn-1(zu67) has a lifespan of 14.6 days and wild type has a lifespan of 18.6 days.
Opposite lifespan effects of single mutants
Dottermusch M et al., 2016, Cell cycle controls stress response and longevity in C. elegans. Aging (Albany NY). 8(9):2100-2126 27668945 Click here to select all mutants from this PubMed ID in the graph
20
NGM
17.7
-13.24%
cdk-2(RNAi) fails to extend lifespan in the skn-1(zu67) mutant.
Double mutant cdk-2(RNAi);skn-1(zu67) has a lifespan of 17.7 days, while single mutant cdk-2(RNAi) has a lifespan of 25.5 days, single mutant skn-1(zu67) has a lifespan of 18.0 days and wild type has a lifespan of 20.4 days.
Opposite lifespan effects of single mutants
Dottermusch M et al., 2016, Cell cycle controls stress response and longevity in C. elegans. Aging (Albany NY). 8(9):2100-2126 27668945 Click here to select all mutants from this PubMed ID in the graph
Cyclin-Dependent Kinase family;Cyclin-dependent kinase 2
Locus: CELE_K03E5.3
Wormbase description: cdk-2 encodes the C. elegans ortholog of cyclin-dependent kinase 2; along with CYE-1 (cyclin E), CDK-2 is required for the G1/S transition in somatic cells, centrosome assembly and polarity establishment in the embryo, proliferation of germ cells, and suppression of terminal differentiation in quiescent cells after asymmetric division; CYE-1 and CDK-2 also regulate the germline mitosis/meiosis decision through post-translational regulation of GLD-1, likely direct phosphorylation.
Protein skinhead-1;SKiNhead
Locus: CELE_T19E7.2
Wormbase description: skn-1 encodes a bZip transcription factor orthologous to the mammalian Nrf (Nuclear factor-erythroid-related factor) transcription factors; during early embryogenesis, maternally provided SKN-1 is required for specification of the EMS blastomere, a mesendodermal precursor that gives rise to pharyngeal, muscle, and intestinal cells; later, during postembryonic development, SKN-1 functions in the p38 MAPK pathway to regulate the oxidative stress response and in parallel to DAF-16/FOXO in the DAF-2-mediated insulin/IGF-1-like signaling pathway to regulate adult lifespan; in vitro assays indicate that SKN-1 can be directly phosphorylated by the AKT-1, AKT-2, and SGK-1 kinases that lie downstream of DAF-2 in the insulin signaling pathway and in vivo experiments suggest that this phosphorylation is essential for regulation of SKN-1 nuclear accumulation and hence, transcriptional regulator activity; in the early embryo, SKN-1 is detected at highest levels in nuclei of the P1 blastomere and its descendants through the 8-cell stage of embryogenesis; later in embryogenesis, SKN-1 is observed in all hypodermal and intestinal nuclei, with reporter constructs indicating that intestinal expression begins as early as the 50-100-cell stage; in larvae and young adults, SKN-1::GFP reporters are expressed in the intestine and ASI neurons, with expression in intestinal nuclei enhanced under conditions of stress or reduced DAF-2 signaling.
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SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.
If you would like to cite this database please use:
Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z
Group webpage: www.aging-research.group