clk-2;gro-1

Lifespan changes: From wild type to clk-2;gro-1

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Genetic mutants with clk-2, gro-1 alterations

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    18

  • Lifespan (days)

    12.3

  • Lifespan change (compared to wild type)

    -17.45%

  • Phenotype

    gro-1(e2400); clk-2(qm37) double mutants have a mean life-span similar to that of the wild type.

  • Lifespan comparisons

    Double mutant clk-2(qm37);gro-1(e2400) has a lifespan of 12.3 days, while single mutant clk-2(qm37) has a lifespan of 18.7 days, single mutant gro-1(e2400) has a lifespan of 19.2 days and wild type has a lifespan of 14.9 days.

  • Type of interaction
    See methods

    Antagonistic (negative)

  • Citation
    View abstract

    Lakowski B, Hekimi S, 1996, Determination of life-span in Caenorhabditis elegans by four clock genes. Science. 272(5264):1010-3 PubMed 8638122 Click here to select all mutants from this PubMed ID in the graph

  • Temperature °C

    15

  • Lifespan (days)

    21.4

  • Lifespan comparisons

    Double mutant clk-2(qm37);gro-1(e2400) has a lifespan of 21.4 days, while single mutant clk-2(qm37) has a lifespan of 24.6 days and single mutant gro-1(e2400) has a lifespan of 26.0 days.

  • Type of interaction
    See methods

    Contains dependence

  • Citation
    View abstract

    Lakowski B, Hekimi S, 1996, Determination of life-span in Caenorhabditis elegans by four clock genes. Science. 272(5264):1010-3 PubMed 8638122 Click here to select all mutants from this PubMed ID in the graph

Search genes: clk-2 gro-1
  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Telomere length regulation protein clk-2


Locus: CELE_C07H6.6


Wormbase description: The clk-2 gene encodes an ortholog of the S. cerevisiae telomere length-regulating protein Tel2p that has been shown to bind a number of DNA structures in vitro, including single-, double- and four-stranded DNA; in C. elegans, CLK-2 activity is required for the DNA damage and S phase replication checkpoints, for embryonic development, and for normal biological rhythms and life span; a functional CLK-2::GFP fusion protein is detected exclusively in the cytoplasm of somatic tissues.


  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

hypothetical protein


Locus: CELE_ZC395.6


Wormbase description: gro-1 encodes two isoforms of the C. elegans isopentenylpyroptiosphate:tRNA transferase (IPT) ortholog; by homology, GRO-1 is predicted to function in modification of a subset of tRNAs; in C. elegans, a loss-of-function mutation in gro-1 results in delayed embryogenesis and postembryonic development, slower rates of adult behaviors, reduced brood size, and a genetic background-specific increase in adult life span; gro-1's effect on embryonic development exhibits a strict maternal effect; GRO-1::GFP fusion proteins are widely expressed and localize to the cytoplasm, nucleus, and mitochondria.


Orthologs of clk-2;gro-1 in SynergyAge
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Orthologs of clk-2 in SynergyAge
Show in SynergyAge
Species Gene
Orthologs of gro-1 in SynergyAge
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Species Gene
About

SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.

Read more about SynergyAge database

How to cite us

If you would like to cite this database please use:

Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z

Contact
Robi Tacutu, Ph.D.
Head: Systems Biology of Aging Group, Bioinformatics & Structural Biochemistry Department
Institute of Biochemistry, Ground floor
Splaiul Independentei 296, Bucharest, Romania
Email:

Group webpage: www.aging-research.group