Lifespan changes: From wild type to clk-2;gro-1
18
12.3
-17.45%
gro-1(e2400); clk-2(qm37) double mutants have a mean life-span similar to that of the wild type.
Double mutant clk-2(qm37);gro-1(e2400) has a lifespan of 12.3 days, while single mutant clk-2(qm37) has a lifespan of 18.7 days, single mutant gro-1(e2400) has a lifespan of 19.2 days and wild type has a lifespan of 14.9 days.
Antagonistic (negative)
Lakowski B, Hekimi S, 1996, Determination of life-span in Caenorhabditis elegans by four clock genes. Science. 272(5264):1010-3 8638122 Click here to select all mutants from this PubMed ID in the graph
15
21.4
Double mutant clk-2(qm37);gro-1(e2400) has a lifespan of 21.4 days, while single mutant clk-2(qm37) has a lifespan of 24.6 days and single mutant gro-1(e2400) has a lifespan of 26.0 days.
Contains dependence
Lakowski B, Hekimi S, 1996, Determination of life-span in Caenorhabditis elegans by four clock genes. Science. 272(5264):1010-3 8638122 Click here to select all mutants from this PubMed ID in the graph
Telomere length regulation protein clk-2
Locus: CELE_C07H6.6
Wormbase description: The clk-2 gene encodes an ortholog of the S. cerevisiae telomere length-regulating protein Tel2p that has been shown to bind a number of DNA structures in vitro, including single-, double- and four-stranded DNA; in C. elegans, CLK-2 activity is required for the DNA damage and S phase replication checkpoints, for embryonic development, and for normal biological rhythms and life span; a functional CLK-2::GFP fusion protein is detected exclusively in the cytoplasm of somatic tissues.
hypothetical protein
Locus: CELE_ZC395.6
Wormbase description: gro-1 encodes two isoforms of the C. elegans isopentenylpyroptiosphate:tRNA transferase (IPT) ortholog; by homology, GRO-1 is predicted to function in modification of a subset of tRNAs; in C. elegans, a loss-of-function mutation in gro-1 results in delayed embryogenesis and postembryonic development, slower rates of adult behaviors, reduced brood size, and a genetic background-specific increase in adult life span; gro-1's effect on embryonic development exhibits a strict maternal effect; GRO-1::GFP fusion proteins are widely expressed and localize to the cytoplasm, nucleus, and mitochondria.
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SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.
If you would like to cite this database please use:
Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z
Group webpage: www.aging-research.group