ced-4;isp-1

Lifespan changes: From wild type to ced-4;isp-1 / From ced-4;isp-1 to multiple mutants

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Genetic mutants with ced-4, isp-1 alterations

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    20

  • Diet

    OP50

  • Lifespan (days)

    25.74

  • Lifespan change (compared to wild type)

    36.91%

  • Phenotype

    Mutations in ced-13 and ced-4 but not egl-1 partially suppressed all these phenotypes of both isp-1 and nuo-6

  • Lifespan comparisons

    Double mutant ced-4(n1162);isp-1(qm150) has a lifespan of 25.74 days, while single mutant ced-4(n1162) has a lifespan of 18.18 days, single mutant isp-1(qm150) has a lifespan of 34.67 days and wild type has a lifespan of 18.8 days.

  • Type of interaction
    See methods

    Opposite lifespan effects of single mutants

  • Citation
    View abstract

    Yee C et al., 2014, The intrinsic apoptosis pathway mediates the pro-longevity response to mitochondrial ROS in C. elegans. Cell. 157(4):897-909 PubMed 24813612 Click here to select all mutants from this PubMed ID in the graph

  • Temperature °C

    20

  • Diet

    OP50

  • Lifespan (days)

    26.28

  • Lifespan change (compared to wild type)

    43.92%

  • Phenotype

    The ced-4 gene mutation suppressed the down-regulation of 62% of the genes in the case of nuo-6 but only 18% in the case of isp-1.

  • Lifespan comparisons

    Double mutant ced-4(n1162);isp-1(qm150) has a lifespan of 26.28 days, while single mutant ced-4(n1162) has a lifespan of 18.42 days, single mutant isp-1(qm150) has a lifespan of 34.27 days and wild type has a lifespan of 18.26 days.

  • Type of interaction
    See methods

    Dependent

  • Citation
    View abstract

    Yee C et al., 2014, The intrinsic apoptosis pathway mediates the pro-longevity response to mitochondrial ROS in C. elegans. Cell. 157(4):897-909 PubMed 24813612 Click here to select all mutants from this PubMed ID in the graph

  • Temperature °C

    20

  • Diet

    OP50

  • Lifespan (days)

    27.02

  • Lifespan change (compared to wild type)

    31.93%

  • Phenotype

    The ced-4 gene mutation suppressed the down-regulation of 62% of the genes in the case of nuo-6 but only 18% in the case of isp-1.

  • Lifespan comparisons

    Double mutant ced-4(n1162);isp-1(qm150) has a lifespan of 27.02 days, while single mutant ced-4(n1162) has a lifespan of 18.57 days, single mutant isp-1(qm150) has a lifespan of 35.48 days and wild type has a lifespan of 17.55 days.

  • Type of interaction
    See methods

    Dependent

  • Citation
    View abstract

    Yee C et al., 2014, The intrinsic apoptosis pathway mediates the pro-longevity response to mitochondrial ROS in C. elegans. Cell. 157(4):897-909 PubMed 24813612 Click here to select all mutants from this PubMed ID in the graph

  • Temperature °C

    20

  • Diet

    OP50

  • Lifespan (days)

    25.97

  • Lifespan change (compared to wild type)

    28.63%

  • Lifespan comparisons

    Double mutant ced-4(n1162);isp-1(qm150) has a lifespan of 25.97 days, while wild type has a lifespan of 20.19 days.

  • Citation
    View abstract

    Yee C et al., 2014, The intrinsic apoptosis pathway mediates the pro-longevity response to mitochondrial ROS in C. elegans. Cell. 157(4):897-909 PubMed 24813612 Click here to select all mutants from this PubMed ID in the graph

  • Temperature °C

    20

  • Diet

    OP50

  • Lifespan (days)

    26.02

  • Lifespan change (compared to wild type)

    25.46%

  • Lifespan comparisons

    Double mutant ced-4(n1162);isp-1(qm150) has a lifespan of 26.02 days, while wild type has a lifespan of 20.74 days.

  • Citation
    View abstract

    Yee C et al., 2014, The intrinsic apoptosis pathway mediates the pro-longevity response to mitochondrial ROS in C. elegans. Cell. 157(4):897-909 PubMed 24813612 Click here to select all mutants from this PubMed ID in the graph

Search genes: ced-4 isp-1
  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Cell death protein 4


Locus: CELE_C35D10.9


Wormbase description: ced-4 encodes a novel protein; along with CED-3, CED-4 is required for the initiation of programmed cell death; accordingly, genetic analyses indicate that ced-3 and ced-4 function upstream of ced-1, ced-2, and nuc-1 in the programmed cell death pathway; in yeast two-hybrid experiments, and upon coexpression in mammalian cells, CED-4 interacts with CED-9, an anti-apoptotic BCL-2 homolog; coexpression of CED-4 and CED-9 results in redistribution of CED-4 from the cytosol to organellar membranes, suggesting that CED-9 may negatively regulate CED-4 activity by sequestering CED-4 to intracellular membranes.


  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Cytochrome b-c1 complex subunit Rieske, mitochondrial


Locus: CELE_F42G8.12


Wormbase description: isp-1 encodes a Rieske iron sulphur protein (ISP) which is a subunit of the mitochondrial complex III in the mitochondrial membrane; the subunits are highly conserved in all mitochondria and aerobic bacteria; mitochondrial complex III catalyses electron transport from ubiquinol to cytochrome c; isp-1 mutants show low oxygen consumption, a decreased sensitivity to reactive oxygen species and increased lifespan suggesting that mitochondrial electron transport is a key factor affecting life span; isp-1 affects the rates of physiological processes like reproduction and development and also affects behavior.


Orthologs of ced-4;isp-1 in SynergyAge
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Orthologs of ced-4 in SynergyAge
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Orthologs of isp-1 in SynergyAge
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About

SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.

Read more about SynergyAge database

How to cite us

If you would like to cite this database please use:

Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z

Contact
Robi Tacutu, Ph.D.
Head: Systems Biology of Aging Group, Bioinformatics & Structural Biochemistry Department
Institute of Biochemistry, Ground floor
Splaiul Independentei 296, Bucharest, Romania
Email:

Group webpage: www.aging-research.group