ire-1;sod-1

Lifespan changes: From wild type to ire-1;sod-1

There is no network for this step.
Fullscreen mode
Hide graph
Legend

Genetic mutants with ire-1, sod-1 alterations

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    20

  • Lifespan (days)

    21.5

  • Lifespan change (compared to wild type)

    -1.38%

  • Phenotype

    RNAi of ire-1 markedly reduced hsp-4::gfp expression in both the presence and the absence of sod-1 OE.

  • Lifespan comparisons

    Double mutant ire-1(RNAi);sod-1(wuIs152) has a lifespan of 21.5 days, while single mutant ire-1(RNAi) has a lifespan of 16.4 days, single mutant sod-1(wuIs152) has a lifespan of 32.6 days and wild type has a lifespan of 21.8 days.

  • Type of interaction
    See methods

    Opposite lifespan effects of single mutants

  • Citation
    View abstract

    Cabreiro F et al., 2011, Increased life span from overexpression of superoxide dismutase in Caenorhabditis elegans is not caused by decreased oxidative damage. Free Radic Biol Med. 51(8):1575-82 PubMed 21839827 Click here to select all mutants from this PubMed ID in the graph

  • Temperature °C

    20

  • Lifespan (days)

    21.3

  • Lifespan change (compared to wild type)

    8.12%

  • Phenotype

    RNAi of ire-1 markedly reduced hsp-4::gfp expression in both the presence and the absence of sod-1 OE.

  • Lifespan comparisons

    Double mutant ire-1(RNAi);sod-1(wuIs152) has a lifespan of 21.3 days, while single mutant ire-1(RNAi) has a lifespan of 18.0 days, single mutant sod-1(wuIs152) has a lifespan of 25.4 days and wild type has a lifespan of 19.7 days.

  • Type of interaction
    See methods

    Opposite lifespan effects of single mutants

  • Citation
    View abstract

    Cabreiro F et al., 2011, Increased life span from overexpression of superoxide dismutase in Caenorhabditis elegans is not caused by decreased oxidative damage. Free Radic Biol Med. 51(8):1575-82 PubMed 21839827 Click here to select all mutants from this PubMed ID in the graph

Search genes: ire-1 sod-1
  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

IRE1 kinase related;Serine/threonine-protein kinase


Locus: CELE_C41C4.4


Wormbase description: ire-1 encodes a transmembrane serine/threonine protein kinase and site-specific endoribonuclease orthologous to Saccharomyces cerevisiae inositol-requiring 1 protein kinase (Ire1) and human endoplasmic reticulum-to-nucleus signaling 1 (ERN1, OMIM:604033); IRE-1 is required for the unfolded protein response (UPR) that counteracts cellular stress induced by accumulation of unfolded proteins in the endoplasmic reticulum (ER); in response to ER stress, IRE-1 cleaves xbp-1 mRNA to produce transcriptionally active XBP-1 that positively regulates UPR gene expression in order to maintain ER homeostasis.


  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Superoxide dismutase [Cu-Zn]


Locus: CELE_C15F1.7


Wormbase description: sod-1 encodes the copper/zinc superoxide dismustase, an enzyme that is known to protect cells from oxidative damage; superoxide dismutase activity can be detected in worm extracts; sod-1 activity has been implicated in the increased life-span of dauer larvae where this enzyme demonstrates the highest activity compared to other life-stages as well as in the increased life span of age-1 mutants and their resistance to oxidative damage; sod-1 modulates the effect of let-60 ras on vulval and germline development via cytoplasmic reactive oxygen species; unlike other eukaryotic superoxide dismutases, sod-1 does not require the copper chaperone CCS for its activity and instead uses a glutathione pathway for acquiring copper; in humans, mutation of SOD1 (OMIM:147450) leads to amyotrophic lateral sclerosis (OMIM:105400).


Orthologs of ire-1;sod-1 in SynergyAge
Show in SynergyAge
Species Gene
Orthologs of ire-1 in SynergyAge
Show in SynergyAge
Species Gene
Orthologs of sod-1 in SynergyAge
Show in SynergyAge
Species Gene
Drosophila melanogaster Sod1
Mus musculus Sod1
About

SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.

Read more about SynergyAge database

How to cite us

If you would like to cite this database please use:

Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z

Contact
Robi Tacutu, Ph.D.
Head: Systems Biology of Aging Group, Bioinformatics & Structural Biochemistry Department
Institute of Biochemistry, Ground floor
Splaiul Independentei 296, Bucharest, Romania
Email:

Group webpage: www.aging-research.group