clk-1;daf-16

Lifespan changes: From wild type to clk-1;daf-16

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Genetic mutants with clk-1, daf-16 alterations

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    18

  • Lifespan (days)

    20.3

  • Lifespan change (compared to wild type)

    36.24%

  • Phenotype

    daf-16(m26) does not suppress the life-span extension seen in clk-1(e2519).

  • Lifespan comparisons

    Double mutant clk-1(e2519);daf-16(m26) has a lifespan of 20.3 days, while single mutant clk-1(e2519) has a lifespan of 18.4 days, single mutant daf-16(m26) has a lifespan of 15.1 days and wild type has a lifespan of 14.9 days.

  • Type of interaction
    See methods

    Synergistic (positive)

  • Citation
    View abstract

    Lakowski B, Hekimi S, 1996, Determination of life-span in Caenorhabditis elegans by four clock genes. Science. 272(5264):1010-3 PubMed 8638122 Click here to select all mutants from this PubMed ID in the graph

  • Temperature °C

    18

  • Lifespan (days)

    23.5

  • Lifespan change (compared to wild type)

    12.98%

  • Phenotype

    daf-16(m26); clk-1(e2519) double mutants still live significantly longer than the wild type.

  • Lifespan comparisons

    Double mutant clk-1(e2519);daf-16(m26) has a lifespan of 23.5 days, while single mutant clk-1(e2519) has a lifespan of 25.0 days, single mutant daf-16(m26) has a lifespan of 19.0 days and wild type has a lifespan of 20.8 days.

  • Type of interaction
    See methods

    Opposite lifespan effects of single mutants

  • Citation
    View abstract

    Lakowski B, Hekimi S, 1998, The genetics of caloric restriction in Caenorhabditis elegans. Proc Natl Acad Sci U S A. 95(22):13091-6 PubMed 9789046 Click here to select all mutants from this PubMed ID in the graph

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    20

  • Lifespan (days)

    15.5

  • Lifespan change (compared to wild type)

    -15.30%

  • Lifespan comparisons

    Double mutant clk-1(qm30);daf-16(RNAi) has a lifespan of 15.5 days, while single mutant clk-1(qm30) has a lifespan of 19.3 days and wild type has a lifespan of 18.3 days.

  • Type of interaction
    See methods

    Contains dependence

  • Citation
    View abstract

    Wolff S et al., 2006, SMK-1, an essential regulator of DAF-16-mediated longevity. Cell. 124(5):1039-53 PubMed 16530049 Click here to select all mutants from this PubMed ID in the graph

Search genes: clk-1 daf-16
  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

5-demethoxyubiquinone hydroxylase, mitochondrial


Locus: CELE_ZC395.2


Wormbase description: clk-1 encodes the C. elegans ortholog of COQ7/CAT5, a highly conserved demethoxyubiquinone (DMQ) hydroxylase that is necessary for the biosynthesis of ubiquinone (coenzyme Q, Q9) from 5-demethoxyubiquinone (DMQ9); in C. elegans, CLK-1 activity is required for normal physiological rates of growth, development, behavior, and aging, as well as for normal brood sizes.


  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Forkhead box protein O;hypothetical protein


Locus: CELE_R13H8.1


Wormbase description: daf-16 encodes the sole C. elegans forkhead box O (FOXO) homologue; DAF-16 functions as a transcription factor that acts in the insulin/IGF-1-mediated signaling (IIS) pathway that regulates dauer formation, longevity, fat metabolism, stress response, and innate immunity; DAF-16 regulates these various processes through isoform-specific expression, isoform-specific regulation by different AKT kinases, and differential regulation of target genes; DAF-16 can interact with the CBP-1 transcription cofactor in vitro, and interacts genetically with other genes in the insulin signaling and with daf-12, which encodes a nuclear hormone receptor; DAF-16 is activated in response to DNA damage during development and co-regulated by EGL-27, alleviates DNA-damage-induced developmental arrest by inducing DAF-16-associated element (DAE)-regulated genes; DAF-16 is broadly expressed but displays isoform-specific tissue enrichment; DAF-16 localizes to both the cytoplasm and the nucleus, with the ratio between the two an important regulator of function.


Orthologs of clk-1;daf-16 in SynergyAge
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Orthologs of clk-1 in SynergyAge
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Orthologs of daf-16 in SynergyAge
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About

SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.

Read more about SynergyAge database

How to cite us

If you would like to cite this database please use:

Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z

Contact
Robi Tacutu, Ph.D.
Head: Systems Biology of Aging Group, Bioinformatics & Structural Biochemistry Department
Institute of Biochemistry, Ground floor
Splaiul Independentei 296, Bucharest, Romania
Email:

Group webpage: www.aging-research.group