daf-16;ocr-2

Lifespan changes: From wild type to daf-16;ocr-2

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Genetic mutants with daf-16, ocr-2 alterations

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    20

  • Lifespan (days)

    13.7

  • Lifespan change (compared to wild type)

    -29.02%

  • Phenotype

    Lifespans of two independent ocr-2 mutants on plates containing FUDR, a drug that inhibits progeny production. Loss of ocr-2 substantially extends adult lifespan

  • Lifespan comparisons

    Double mutant daf-16(mgDf47);ocr-2(ak47) has a lifespan of 13.7 days, while single mutant ocr-2(ak47) has a lifespan of 31.2 days, single mutant daf-16(mgDf47) has a lifespan of 14.0 days and wild type has a lifespan of 19.3 days.

  • Type of interaction
    See methods

    Opposite lifespan effects of single mutants

  • Citation
    View abstract

    Lee BH, Ashrafi K, 2008, A TRPV channel modulates C. elegans neurosecretion, larval starvation survival, and adult lifespan. PLoS Genet. 4(10):e1000213 PubMed 18846209 Click here to select all mutants from this PubMed ID in the graph

  • Temperature °C

    20

  • Lifespan (days)

    14.8

  • Lifespan change (compared to wild type)

    -22.92%

  • Phenotype

    Lifespans of two independent ocr-2 mutants on plates containing FUDR, a drug that inhibits progeny production. Loss of ocr-2 substantially extends adult lifespan

  • Lifespan comparisons

    Double mutant daf-16(mgDf47);ocr-2(ak47) has a lifespan of 14.8 days, while single mutant ocr-2(ak47) has a lifespan of 29.8 days, single mutant daf-16(mgDf47) has a lifespan of 14.1 days and wild type has a lifespan of 19.2 days.

  • Type of interaction
    See methods

    Opposite lifespan effects of single mutants

  • Citation
    View abstract

    Lee BH, Ashrafi K, 2008, A TRPV channel modulates C. elegans neurosecretion, larval starvation survival, and adult lifespan. PLoS Genet. 4(10):e1000213 PubMed 18846209 Click here to select all mutants from this PubMed ID in the graph

  • Temperature °C

    23

  • Diet

    Starvation

  • Lifespan (days)

    4.9

  • Lifespan change (compared to wild type)

    -48.96%

  • Phenotype

    Pronounced cilia defects were required to cause enhanced L1 starvation survival, since che-2(e1033), che-3(e1124), and bbs-1(k1111); osm-12(n1606); bbs-8(nx77) triple mutants.

  • Lifespan comparisons

    Double mutant daf-16(mgDf47);ocr-2(ak47) has a lifespan of 4.9 days, while single mutant ocr-2(ak47) has a lifespan of 12.4 days, single mutant daf-16(mgDf47) has a lifespan of 4.7 days and wild type has a lifespan of 9.6 days.

  • Type of interaction
    See methods

    Opposite lifespan effects of single mutants

  • Citation
    View abstract

    Lee BH, Ashrafi K, 2008, A TRPV channel modulates C. elegans neurosecretion, larval starvation survival, and adult lifespan. PLoS Genet. 4(10):e1000213 PubMed 18846209 Click here to select all mutants from this PubMed ID in the graph

Search genes: daf-16 ocr-2
  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Forkhead box protein O;hypothetical protein


Locus: CELE_R13H8.1


Wormbase description: daf-16 encodes the sole C. elegans forkhead box O (FOXO) homologue; DAF-16 functions as a transcription factor that acts in the insulin/IGF-1-mediated signaling (IIS) pathway that regulates dauer formation, longevity, fat metabolism, stress response, and innate immunity; DAF-16 regulates these various processes through isoform-specific expression, isoform-specific regulation by different AKT kinases, and differential regulation of target genes; DAF-16 can interact with the CBP-1 transcription cofactor in vitro, and interacts genetically with other genes in the insulin signaling and with daf-12, which encodes a nuclear hormone receptor; DAF-16 is activated in response to DNA damage during development and co-regulated by EGL-27, alleviates DNA-damage-induced developmental arrest by inducing DAF-16-associated element (DAE)-regulated genes; DAF-16 is broadly expressed but displays isoform-specific tissue enrichment; DAF-16 localizes to both the cytoplasm and the nucleus, with the ratio between the two an important regulator of function.


  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Osm-9 and Capsaicin receptor-Related


Locus: CELE_T09A12.3


Wormbase description: ocr-2 encodes a TRPV (transient receptor potential channel, vanilloid subfamily) ion channel; OCR-2 activity is required for several types of sensory transduction including olfaction, osmosensation, mechanosensation, and chemosensation; an OCR-2 fusion protein is expressed in sensory cilia and requires the OSM-9 TRPV channel protein for proper localization; likewise, OSM-9 requires OCR-2 for its cilial localization.


Orthologs of daf-16;ocr-2 in SynergyAge
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Orthologs of daf-16 in SynergyAge
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Orthologs of ocr-2 in SynergyAge
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About

SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.

Read more about SynergyAge database

How to cite us

If you would like to cite this database please use:

Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z

Contact
Robi Tacutu, Ph.D.
Head: Systems Biology of Aging Group, Bioinformatics & Structural Biochemistry Department
Institute of Biochemistry, Ground floor
Splaiul Independentei 296, Bucharest, Romania
Email:

Group webpage: www.aging-research.group