cku-70;rrf-3

Lifespan changes: From wild type to cku-70;rrf-3

There is no network for this step.
Fullscreen mode
Hide graph
Legend

Genetic mutants with cku-70, rrf-3 alterations

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    25

  • Lifespan (days)

    15.5

  • Lifespan change (compared to wild type)

    9.93%

  • Phenotype

    Using rrf-a 3(pk1426) worms that show increased sensitivity to RNAi when compared with wild type, we observed a slight but significant increase (mean increase aprox 14%) in life span after cku-70(RNAi)

  • Lifespan comparisons

    Double mutant cku-70(RNAi);rrf-3(pk1426) has a lifespan of 15.5 days, while single mutant rrf-3(pk1426) has a lifespan of 14.2 days and wild type has a lifespan of 14.1 days.

  • Type of interaction
    See methods

    Partially known monotony. Positive epistasis

  • Citation
    View abstract

    McColl G et al., 2005, The C. elegans ortholog of mammalian Ku70, interacts with insulin-like signaling to modulate stress resistance and life span. FASEB J. 19(12):1716-8 PubMed 16099946 Click here to select all mutants from this PubMed ID in the graph

Search genes: cku-70 rrf-3
  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Caenorhabditis KU


Locus: CELE_Y47D3A.4


Wormbase description: cku-70 encodes an ortholog of human XRCC6 (Ku70; OMIM:152690, antigen of systemic lupus erythematosus); CKU-70 is required for resistance to ionizing radiation (IR) in somatic tissues (such as motor neurons, vulva or uterus) and in endoreduplicating intestinal cells, but not in the germline; CKU-70 is also required for survival of dauer larvae subjected to IR, and for resistance of developing embryos to methyl methane sulfonate; CKU-70, unlike CKU-80, inhibits DAF-16-dependent thermotolerance, and slightly shortens normal lifespan; CKU-70 binds CKU-80 in yeast two-hybrid assays, and requires HIM-10 for fully effective DNA repair in somatic cells; by orthology, CKU-70 is expected to function (as a heterodimer with CKU-80) in nonhomologous end-joining of double-stranded breaks in DNA; mutant cku-70 late-stage embryos or dauer larvae are hypersensitive to radiation-induced DNA damage in somatic cells; after irradiation, cku-70 mutants tend to display various postembryonic phenotypes (such as slow growth, uncoordinated locomotion, impaired egg-laying, or vulval defects) that are enhanced by him-10 mutations, and that are thought to reflect missegregation of fragmented chromosomes; cku-70(RNAi) animals show a minor extension of lifespan in an rrf-3(pk1426) mutant background, independently of the presence or absence of either functional DAF-2 or germline cells, but a reduction of lifespan with a loss of DAF-16 activity.


  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

RNA-dependent RNA polymerase Family


Locus: CELE_F10B5.7


Wormbase description: rrf-3 encodes an RNA-directed RNA polymerase (RdRP) homolog that inhibits somatic RNAi, and thus promotes activity of repeated genes (e.g., multicopy transgenic arrays); the effect of RRF-3 on RNAi is opposite to that of RRF-1 (which stimulates somatic RNAi), which might arise from competition by RRF-3 with RRF-1 or EGO-1 in RNAi formation; rrf-3(allele) or rrf-3(allele2) mutants are hypersensitive to somatic RNAi, and conversely suppress the activity of an integrated rol6 (su1006) transgene.


Orthologs of cku-70;rrf-3 in SynergyAge
Show in SynergyAge
Species Gene
Orthologs of cku-70 in SynergyAge
Show in SynergyAge
Species Gene
Orthologs of rrf-3 in SynergyAge
Show in SynergyAge
Species Gene
About

SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.

Read more about SynergyAge database

How to cite us

If you would like to cite this database please use:

Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z

Contact
Robi Tacutu, Ph.D.
Head: Systems Biology of Aging Group, Bioinformatics & Structural Biochemistry Department
Institute of Biochemistry, Ground floor
Splaiul Independentei 296, Bucharest, Romania
Email:

Group webpage: www.aging-research.group