daf-2;egl-27

Lifespan changes: From wild type to daf-2;egl-27

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Genetic mutants with daf-2, egl-27 alterations

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    20

  • Diet

    HT115

  • Lifespan (days)

    16.4

  • Lifespan change (compared to wild type)

    1.86%

  • Phenotype

    If a GATA transcription factor functions specifically to extend life span rather than shorten it, then RNAi treatment may suppress the longevity of a long-lived mutant such as daf-2(e1370) without causing nonspecific early lethality of wild-type worms. Of the ten GATA transcription factor genes, we found that RNAi treatment of three (elt-3, egr-1, and egl-27) behave in this way in multiple independent life span experiments

  • Lifespan comparisons

    Double mutant daf-2(e1370);egl-27(RNAi) has a lifespan of 16.4 days, while single mutant egl-27(RNAi) has a lifespan of 16.4 days, single mutant daf-2(e1370) has a lifespan of 24.1 days and wild type has a lifespan of 16.1 days.

  • Type of interaction
    See methods

    Dependent

  • Citation
    View abstract

    Budovskaya YV et al., 2008, An elt-3/elt-5/elt-6 GATA transcription circuit guides aging in C. elegans. Cell. 134(2):291-303 PubMed 18662544 Click here to select all mutants from this PubMed ID in the graph

  • Temperature °C

    20

  • Diet

    HT115

  • Lifespan (days)

    24.6

  • Lifespan change (compared to wild type)

    58.71%

  • Phenotype

    If a GATA transcription factor functions specifically to extend life span rather than shorten it, then RNAi treatment may suppress the longevity of a long-lived mutant such as daf-2(e1370) without causing nonspecific early lethality of wild-type worms. Of the ten GATA transcription factor genes, we found that RNAi treatment of three (elt-3, egr-1, and egl-27) behave in this way in multiple independent life span experiments

  • Lifespan comparisons

    Double mutant daf-2(e1370);egl-27(RNAi) has a lifespan of 24.6 days, while single mutant egl-27(RNAi) has a lifespan of 15.7 days, single mutant daf-2(e1370) has a lifespan of 29.6 days and wild type has a lifespan of 15.5 days.

  • Type of interaction
    See methods

    Dependent

  • Citation
    View abstract

    Budovskaya YV et al., 2008, An elt-3/elt-5/elt-6 GATA transcription circuit guides aging in C. elegans. Cell. 134(2):291-303 PubMed 18662544 Click here to select all mutants from this PubMed ID in the graph

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    15-20

  • Diet

    NG agar: 3 g NaC1, 2.5 Bactopeptone (Difco) and 17 g Bacto-agar (Difco) are dissolved in 975 ml distilled water. After autoclaving, 1 ml cholesterol in ethanol (5 mg/ml), 1 ml M CaCl,1 ml M MgSO, and 25 ml M potassium phosphate buffer (pH 6.0) are added in order.

  • Lifespan (days)

    31.0

  • Phenotype

    These data show that egl-27(we3) suppresses daf-2(e1370) longevity to approximately the same extent as daf-16(mu86).

  • Lifespan comparisons

    Double mutant daf-2(e1370);egl-27(we3) has a lifespan of 31.0 days, while single mutant egl-27(we3) has a lifespan of 28.0 days, single mutant daf-2(e1370) has a lifespan of 49.0 days and wild type has a lifespan of 31.0 days.

  • Type of interaction
    See methods

    Opposite lifespan effects of single mutants

  • Citation
    View abstract

    Xu X, Kim SK, 2012;8(12):e1003108., The GATA transcription factor egl-27 delays aging by promoting stress resistance in Caenorhabditis elegans. PLoS Genet. 8(12):e1003108 PubMed 23271974 Click here to select all mutants from this PubMed ID in the graph

  • Temperature °C

    20

  • Diet

    NGM;OP50

  • Lifespan (days)

    26.11

  • Lifespan change (compared to wild type)

    20.54%

  • Phenotype

    Disruption of egl-27(we3) shortens daf-2(e1370) lifespan.

  • Lifespan comparisons

    Double mutant daf-2(e1370);egl-27(we3) has a lifespan of 26.11 days, while single mutant egl-27(we3) has a lifespan of 18.88 days, single mutant daf-2(e1370) has a lifespan of 35.55 days and wild type has a lifespan of 21.66 days.

  • Type of interaction
    See methods

    Opposite lifespan effects of single mutants

  • Citation
    View abstract

    Dues DJ et al., 2019, Resistance to Stress Can Be Experimentally Dissociated From Longevity. J Gerontol A Biol Sci Med Sci. 74(8):1206-1214 PubMed 30247515 Click here to select all mutants from this PubMed ID in the graph

Search genes: daf-2 egl-27
  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Insulin-like receptor subunit beta;Receptor protein-tyrosine kinase;hypothetical protein


Locus: CELE_Y55D5A.5


Wormbase description: daf-2 encodes a receptor tyrosine kinase that is the C. elegans insulin/IGF receptor ortholog; DAF-2 activity is required for a number of processes in C. elegans, including embryonic and larval development, formation of the developmentally arrested dauer larval stage (diapause), larval developmental timing, adult longevity, reproduction, fat storage, salt chemotaxis learning, and stress resistance, including response to high temperature, oxidative stress, and bacterial infection; DAF-2 signals through a conserved PI 3-kinase pathway to negatively regulate the activity of DAF-16, a Forkhead-related transcription factor, by inducing its phosphorylation and nuclear exclusion; in addition, DAF-2 negatively regulates the nuclear localization, and hence transcriptional activity, of SKN-1 in intestinal nuclei; amongst the 38 predicted insulin-like molecules in C. elegans, genetic and microarray analyses suggest that at least DAF-28, INS-1, and INS-7 are likely DAF-2 ligands; genetic mosaic and tissue-specific promoter studies indicate that daf-2 can function cell nonautonomously and within multiple cell types to influence dauer formation and adult lifespan, likely by regulating the production of secondary endocrine signals that coordinate growth and longevity throughout the animal; temporal analysis of daf-2 function indicates that daf-2 regulates lifespan, reproduction, and diapause independently, at distinct times during the animal's life cycle.


  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Egg-laying defective protein 27;hypothetical protein


Locus: CELE_C04A2.3


Wormbase description: egl-27 encodes, along with lin-40, one of two C. elegans homologs of human MTA1 (metastasis-associated protein), part of a nucleosome remodeling and histone deacetylation (NURD) complex; in conjunction with its paralog egr-1, egl-27 is required for proper organization in all parts of the embryo, and for the embryonic expression of hlh-8; egl-27 activity is also required for transdifferentiation of the Y rectal cell to the PDA neuron during larval development; EGL-27 acts downstream of DAF-2 and recognizes the GATA/DAE (DAF-16-associated element) promoter motif of DAF-16 target genes; together with DAF-16 it promotes developmental growth in response to DNA damage.


Orthologs of daf-2;egl-27 in SynergyAge
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Species Gene
Orthologs of daf-2 in SynergyAge
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Species Gene
Drosophila melanogaster InR
Orthologs of egl-27 in SynergyAge
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Species Gene
About

SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.

Read more about SynergyAge database

How to cite us

If you would like to cite this database please use:

Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z

Contact
Robi Tacutu, Ph.D.
Head: Systems Biology of Aging Group, Bioinformatics & Structural Biochemistry Department
Institute of Biochemistry, Ground floor
Splaiul Independentei 296, Bucharest, Romania
Email:

Group webpage: www.aging-research.group